Protein–RNA interactions for Protein: Q03957

CTK1, CTD kinase subunit alpha, yeastyeast

Known RBP Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK1Q03957 YDL180WYDL180W 1644 nt3.23□□□□□ -1.89
CTK1Q03957 HEF3YNL014W 3135 nt3.23□□□□□ -1.89
CTK1Q03957 FAP7YDL166C 594 nt3.23□□□□□ -1.89
CTK1Q03957 PHO81YGR233C 3537 nt3.23□□□□□ -1.89
CTK1Q03957 YMR122W-AYMR122W-A 255 nt3.23□□□□□ -1.89
CTK1Q03957 RPS7BYNL096C 573 nt3.23□□□□□ -1.89
CTK1Q03957 MED1YPR070W 1701 nt3.23□□□□□ -1.89
CTK1Q03957 SLM6YBR266C 453 nt3.23□□□□□ -1.89
CTK1Q03957 DPB11YJL090C 2295 nt3.23□□□□□ -1.89
CTK1Q03957 21S_rRNA21S_rRNA 3296 nt3.23□□□□□ -1.89
CTK1Q03957 FAA2YER015W 2235 nt3.23□□□□□ -1.89
CTK1Q03957 NSP1YJL041W 2472 nt3.22□□□□□ -1.89
CTK1Q03957 STN1YDR082W 1485 nt3.22□□□□□ -1.89
CTK1Q03957 KIN82YCR091W 2163 nt3.22□□□□□ -1.89
CTK1Q03957 YLR001CYLR001C 2589 nt3.22□□□□□ -1.89
CTK1Q03957 SYT1YPR095C 3681 nt3.22□□□□□ -1.89
CTK1Q03957 UBP5YER144C 2418 nt3.22□□□□□ -1.89
CTK1Q03957 AKR1YDR264C 2295 nt3.22□□□□□ -1.89
CTK1Q03957 ZDS2YML109W 2829 nt3.22□□□□□ -1.89
CTK1Q03957 FAS1YKL182W 6156 nt3.22□□□□□ -1.89
CTK1Q03957 ATP17YDR377W 306 nt3.22□□□□□ -1.89
CTK1Q03957 YDR413CYDR413C 576 nt3.22□□□□□ -1.89
CTK1Q03957 SPC72YAL047C 1869 nt3.22□□□□□ -1.89
CTK1Q03957 MDM32YOR147W 1869 nt3.22□□□□□ -1.89
CTK1Q03957 YJR003CYJR003C 1560 nt3.21□□□□□ -1.89
CTK1Q03957 SNT1YCR033W 3681 nt3.21□□□□□ -1.9
CTK1Q03957 XRN1YGL173C 4587 nt3.21□□□□□ -1.9
CTK1Q03957 YGR237CYGR237C 2358 nt3.21□□□□□ -1.9
CTK1Q03957 YGR107WYGR107W 450 nt3.21□□□□□ -1.9
CTK1Q03957 RPS21BYJL136C 264 nt3.21□□□□□ -1.9
CTK1Q03957 HEM4YOR278W 828 nt3.21□□□□□ -1.9
CTK1Q03957 YPL276WYPL276W 438 nt3.21□□□□□ -1.9
CTK1Q03957 NUP60YAR002W 1620 nt3.21□□□□□ -1.9
CTK1Q03957 SNF12YNR023W 1701 nt3.21□□□□□ -1.9
CTK1Q03957 ARK1YNL020C 1917 nt3.21□□□□□ -1.9
CTK1Q03957 GYL1YMR192W 2163 nt3.2□□□□□ -1.9
CTK1Q03957 snR65snR65 100 nt3.2□□□□□ -1.9
CTK1Q03957 YFL065CYFL065C 309 nt3.2□□□□□ -1.9
CTK1Q03957 NOP19YGR251W 591 nt3.2□□□□□ -1.9
CTK1Q03957 RPC10YHR143W-A 213 nt3.2□□□□□ -1.9
CTK1Q03957 YHR214C-EYHR214C-E 300 nt3.2□□□□□ -1.9
CTK1Q03957 YJR023CYJR023C 402 nt3.2□□□□□ -1.9
CTK1Q03957 YAR070CYAR070C 300 nt3.2□□□□□ -1.9
CTK1Q03957 YOR282WYOR282W 321 nt3.2□□□□□ -1.9
CTK1Q03957 ATP3YBR039W 936 nt3.2□□□□□ -1.9
CTK1Q03957 RPS23BYPR132W 438 nt3.2□□□□□ -1.9
CTK1Q03957 YKL100CYKL100C 1764 nt3.2□□□□□ -1.9
CTK1Q03957 PEX1YKL197C 3132 nt3.19□□□□□ -1.9
CTK1Q03957 tC(GCA)BtC(GCA)B 72 nt3.19□□□□□ -1.9
CTK1Q03957 tC(GCA)GtC(GCA)G 72 nt3.19□□□□□ -1.9
CTK1Q03957 tC(GCA)P1tC(GCA)P1 72 nt3.19□□□□□ -1.9
CTK1Q03957 tC(GCA)P2tC(GCA)P2 72 nt3.19□□□□□ -1.9
CTK1Q03957 GPI8YDR331W 1236 nt3.19□□□□□ -1.9
CTK1Q03957 IRC4YDR540C 540 nt3.19□□□□□ -1.9
CTK1Q03957 ERG28YER044C 447 nt3.19□□□□□ -1.9
CTK1Q03957 KAP95YLR347C 2586 nt3.19□□□□□ -1.9
CTK1Q03957 YCG1YDR325W 3108 nt3.19□□□□□ -1.9
CTK1Q03957 VHR2YER064C 1518 nt3.19□□□□□ -1.9
CTK1Q03957 HFM1YGL251C 3564 nt3.18□□□□□ -1.9
CTK1Q03957 RPA135YPR010C 3612 nt3.18□□□□□ -1.9
CTK1Q03957 TRZ1YKR079C 2517 nt3.18□□□□□ -1.9
CTK1Q03957 PAU10YDR542W 363 nt3.18□□□□□ -1.9
CTK1Q03957 HPA3YEL066W 540 nt3.18□□□□□ -1.9
CTK1Q03957 PAU11YGL261C 363 nt3.18□□□□□ -1.9
CTK1Q03957 LSM1YJL124C 519 nt3.18□□□□□ -1.9
CTK1Q03957 RPL37AYLR185W 267 nt3.18□□□□□ -1.9
CTK1Q03957 PAU4YLR461W 363 nt3.18□□□□□ -1.9
CTK1Q03957 RPL19BYBL027W 570 nt3.18□□□□□ -1.9
CTK1Q03957 YNL043CYNL043C 321 nt3.18□□□□□ -1.9
CTK1Q03957 YBL108WYBL108W 306 nt3.18□□□□□ -1.9
CTK1Q03957 GCD10YNL062C 1437 nt3.18□□□□□ -1.9
CTK1Q03957 PWP2YCR057C 2772 nt3.17□□□□□ -1.9
CTK1Q03957 BNI4YNL233W 2679 nt3.17□□□□□ -1.9
CTK1Q03957 BMS1YPL217C 3552 nt3.17□□□□□ -1.9
CTK1Q03957 CHS3YBR023C 3498 nt3.17□□□□□ -1.9
CTK1Q03957 MRH1YDR033W 963 nt3.17□□□□□ -1.9
CTK1Q03957 YDR102CYDR102C 333 nt3.17□□□□□ -1.9
CTK1Q03957 YER066C-AYER066C-A 501 nt3.17□□□□□ -1.9
CTK1Q03957 YER188C-AYER188C-A 300 nt3.17□□□□□ -1.9
CTK1Q03957 YIR040CYIR040C 333 nt3.17□□□□□ -1.9
CTK1Q03957 YJR140W-AYJR140W-A 150 nt3.17□□□□□ -1.9
CTK1Q03957 GOT1YMR292W 417 nt3.17□□□□□ -1.9
CTK1Q03957 ISU1YPL135W 498 nt3.17□□□□□ -1.9
CTK1Q03957 AUS1YOR011W 4185 nt3.17□□□□□ -1.9
CTK1Q03957 SEA4YBL104C 3117 nt3.17□□□□□ -1.9
CTK1Q03957 SWT1YOR166C 1377 nt3.16□□□□□ -1.9
CTK1Q03957 YER107W-AYER107W-A 321 nt3.16□□□□□ -1.9
CTK1Q03957 PEX11YOL147C 711 nt3.16□□□□□ -1.9
CTK1Q03957 TIM18YOR297C 579 nt3.16□□□□□ -1.9
CTK1Q03957 YPR014CYPR014C 330 nt3.16□□□□□ -1.9
CTK1Q03957 TMA108YIL137C 2841 nt3.16□□□□□ -1.9
CTK1Q03957 VBA4YDR119W 2307 nt3.16□□□□□ -1.9
CTK1Q03957 NDT80YHR124W 1884 nt3.16□□□□□ -1.9
CTK1Q03957 YTA7YGR270W 4140 nt3.15□□□□□ -1.9
CTK1Q03957 TIF35YDR429C 825 nt3.15□□□□□ -1.91
CTK1Q03957 tK(UUU)DtK(UUU)D 73 nt3.15□□□□□ -1.91
CTK1Q03957 tK(UUU)G1tK(UUU)G1 73 nt3.15□□□□□ -1.91
CTK1Q03957 tK(UUU)G2tK(UUU)G2 73 nt3.15□□□□□ -1.91
CTK1Q03957 tK(UUU)KtK(UUU)K 73 nt3.15□□□□□ -1.91
CTK1Q03957 tK(UUU)LtK(UUU)L 73 nt3.15□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms