Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCS1Q01581 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HMGCS1Q01581 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCS1Q01581 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
HMGCS1Q01581 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
HMGCS1Q01581 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS1Q01581 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS1Q01581 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
HMGCS1Q01581 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
HMGCS1Q01581 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS1Q01581 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.8■□□□□ 0.76
HMGCS1Q01581 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS1Q01581 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS1Q01581 AC245052.3-201ENST00000450182 901 ntBASIC19.8■□□□□ 0.76
HMGCS1Q01581 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.8■□□□□ 0.76
HMGCS1Q01581 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.8■□□□□ 0.76
HMGCS1Q01581 AC120498.10-201ENST00000621827 505 ntBASIC19.8■□□□□ 0.76
HMGCS1Q01581 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HMGCS1Q01581 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGCS1Q01581 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS1Q01581 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS1Q01581 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.8■□□□□ 0.76
HMGCS1Q01581 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS1Q01581 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS1Q01581 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCS1Q01581 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HMGCS1Q01581 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCS1Q01581 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCS1Q01581 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCS1Q01581 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCS1Q01581 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCS1Q01581 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HMGCS1Q01581 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCS1Q01581 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCS1Q01581 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCS1Q01581 KRT18P14-201ENST00000534205 1250 ntBASIC19.79■□□□□ 0.76
HMGCS1Q01581 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.79■□□□□ 0.76
HMGCS1Q01581 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.79■□□□□ 0.76
HMGCS1Q01581 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HMGCS1Q01581 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HMGCS1Q01581 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCS1Q01581 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HMGCS1Q01581 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCS1Q01581 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCS1Q01581 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HMGCS1Q01581 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS1Q01581 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGCS1Q01581 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS1Q01581 AC004854.2-201ENST00000608450 1441 ntBASIC19.78■□□□□ 0.76
HMGCS1Q01581 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS1Q01581 AL121603.2-201ENST00000557373 2117 ntBASIC19.78■□□□□ 0.76
HMGCS1Q01581 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS1Q01581 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS1Q01581 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGCS1Q01581 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HMGCS1Q01581 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS1Q01581 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCS1Q01581 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCS1Q01581 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCS1Q01581 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCS1Q01581 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCS1Q01581 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCS1Q01581 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HMGCS1Q01581 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS1Q01581 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS1Q01581 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS1Q01581 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS1Q01581 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
HMGCS1Q01581 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS1Q01581 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HMGCS1Q01581 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCS1Q01581 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCS1Q01581 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCS1Q01581 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCS1Q01581 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCS1Q01581 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HMGCS1Q01581 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCS1Q01581 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCS1Q01581 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCS1Q01581 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCS1Q01581 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.77■□□□□ 0.76
HMGCS1Q01581 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCS1Q01581 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.77■□□□□ 0.76
HMGCS1Q01581 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCS1Q01581 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCS1Q01581 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HMGCS1Q01581 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.77■□□□□ 0.75
HMGCS1Q01581 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HMGCS1Q01581 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCS1Q01581 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGCS1Q01581 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.76■□□□□ 0.75
HMGCS1Q01581 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGCS1Q01581 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCS1Q01581 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCS1Q01581 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGCS1Q01581 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCS1Q01581 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCS1Q01581 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGCS1Q01581 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.76■□□□□ 0.75
HMGCS1Q01581 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms