Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIRPAP78324 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.73■□□□□ 0.59
SIRPAP78324 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.73■□□□□ 0.59
SIRPAP78324 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.73■□□□□ 0.59
SIRPAP78324 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.73■□□□□ 0.59
SIRPAP78324 AC010536.3-201ENST00000620306 533 ntBASIC18.73■□□□□ 0.59
SIRPAP78324 LINC01006-201ENST00000333319 2292 ntBASIC18.73■□□□□ 0.59
SIRPAP78324 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SIRPAP78324 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIRPAP78324 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIRPAP78324 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SIRPAP78324 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.73■□□□□ 0.59
SIRPAP78324 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIRPAP78324 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SIRPAP78324 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.73■□□□□ 0.59
SIRPAP78324 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
SIRPAP78324 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPAP78324 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPAP78324 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPAP78324 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPAP78324 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPAP78324 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPAP78324 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPAP78324 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.72■□□□□ 0.59
SIRPAP78324 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SIRPAP78324 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPAP78324 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPAP78324 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SIRPAP78324 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.72■□□□□ 0.59
SIRPAP78324 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.72■□□□□ 0.59
SIRPAP78324 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPAP78324 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.72■□□□□ 0.59
SIRPAP78324 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.72■□□□□ 0.59
SIRPAP78324 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.72■□□□□ 0.59
SIRPAP78324 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.72■□□□□ 0.59
SIRPAP78324 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.72■□□□□ 0.59
SIRPAP78324 AC231657.2-201ENST00000624556 255 ntBASIC18.72■□□□□ 0.59
SIRPAP78324 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPAP78324 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPAP78324 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPAP78324 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SIRPAP78324 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPAP78324 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPAP78324 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPAP78324 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.71■□□□□ 0.59
SIRPAP78324 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPAP78324 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPAP78324 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPAP78324 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPAP78324 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPAP78324 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPAP78324 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.71■□□□□ 0.59
SIRPAP78324 AC005181.1-201ENST00000604782 1256 ntBASIC18.71■□□□□ 0.59
SIRPAP78324 FEM1AP1-201ENST00000431297 1995 ntBASIC18.71■□□□□ 0.59
SIRPAP78324 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPAP78324 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.71■□□□□ 0.59
SIRPAP78324 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPAP78324 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.7■□□□□ 0.58
SIRPAP78324 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPAP78324 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SIRPAP78324 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPAP78324 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPAP78324 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPAP78324 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPAP78324 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.7■□□□□ 0.58
SIRPAP78324 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
SIRPAP78324 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SIRPAP78324 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPAP78324 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPAP78324 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPAP78324 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPAP78324 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPAP78324 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SIRPAP78324 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIRPAP78324 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIRPAP78324 POU5F1P4-201ENST00000413175 1085 ntBASIC18.69■□□□□ 0.58
SIRPAP78324 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.69■□□□□ 0.58
SIRPAP78324 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.69■□□□□ 0.58
SIRPAP78324 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIRPAP78324 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
SIRPAP78324 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
SIRPAP78324 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIRPAP78324 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPAP78324 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SIRPAP78324 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SIRPAP78324 AC061975.6-201ENST00000579045 1553 ntBASIC18.68■□□□□ 0.58
SIRPAP78324 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPAP78324 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.68■□□□□ 0.58
SIRPAP78324 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPAP78324 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPAP78324 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SIRPAP78324 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPAP78324 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SIRPAP78324 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPAP78324 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SIRPAP78324 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.68■□□□□ 0.58
SIRPAP78324 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPAP78324 AL109923.1-201ENST00000618799 583 ntBASIC18.68■□□□□ 0.58
SIRPAP78324 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPAP78324 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms