Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.51□□□□□ -0.09
RPL39P62891 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.51□□□□□ -0.09
RPL39P62891 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.51□□□□□ -0.09
RPL39P62891 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RPL39P62891 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL39P62891 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL39P62891 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.51□□□□□ -0.09
RPL39P62891 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL39P62891 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL39P62891 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPL39P62891 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPL39P62891 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.5□□□□□ -0.09
RPL39P62891 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.5□□□□□ -0.09
RPL39P62891 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RPL39P62891 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RPL39P62891 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RPL39P62891 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
RPL39P62891 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.5□□□□□ -0.09
RPL39P62891 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.5□□□□□ -0.09
RPL39P62891 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.5□□□□□ -0.09
RPL39P62891 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RPL39P62891 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.5□□□□□ -0.09
RPL39P62891 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 AIRN-201ENST00000601203 4374 ntBASIC14.5□□□□□ -0.09
RPL39P62891 AC116562.4-201ENST00000641316 2276 ntBASIC14.5□□□□□ -0.09
RPL39P62891 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RPL39P62891 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
RPL39P62891 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RPL39P62891 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RPL39P62891 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL39P62891 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RPL39P62891 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.49□□□□□ -0.09
RPL39P62891 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RPL39P62891 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RPL39P62891 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.49□□□□□ -0.09
RPL39P62891 KRT16P3-201ENST00000439127 1283 ntBASIC14.49□□□□□ -0.09
RPL39P62891 SRD5A1P1-201ENST00000442297 786 ntBASIC14.49□□□□□ -0.09
RPL39P62891 AP005435.1-201ENST00000529293 1178 ntBASIC14.49□□□□□ -0.09
RPL39P62891 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 AC092171.4-201ENST00000609130 632 ntBASIC14.49□□□□□ -0.09
RPL39P62891 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RPL39P62891 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.49□□□□□ -0.09
RPL39P62891 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RPL39P62891 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.49□□□□□ -0.09
RPL39P62891 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RPL39P62891 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.49□□□□□ -0.09
RPL39P62891 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL39P62891 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RPL39P62891 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
RPL39P62891 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.48□□□□□ -0.09
RPL39P62891 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
RPL39P62891 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RPL39P62891 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL39P62891 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL39P62891 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RPL39P62891 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.48□□□□□ -0.09
RPL39P62891 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL39P62891 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.48□□□□□ -0.09
RPL39P62891 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL39P62891 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RPL39P62891 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.48□□□□□ -0.09
RPL39P62891 AL356740.2-201ENST00000601559 647 ntBASIC14.48□□□□□ -0.09
RPL39P62891 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.48□□□□□ -0.09
RPL39P62891 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.48□□□□□ -0.09
RPL39P62891 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL39P62891 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL39P62891 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RPL39P62891 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RPL39P62891 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL39P62891 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms