Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CKS1BP61024 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CKS1BP61024 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS1BP61024 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS1BP61024 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.32□□□□□ -0.12
CKS1BP61024 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.32□□□□□ -0.12
CKS1BP61024 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS1BP61024 MIR4787-201ENST00000607364 84 ntBASIC14.32□□□□□ -0.12
CKS1BP61024 AC241377.3-202ENST00000626088 1088 ntBASIC14.32□□□□□ -0.12
CKS1BP61024 AC241585.3-202ENST00000628937 1088 ntBASIC14.32□□□□□ -0.12
CKS1BP61024 AC245100.8-202ENST00000629247 1058 ntBASIC14.32□□□□□ -0.12
CKS1BP61024 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.32□□□□□ -0.12
CKS1BP61024 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CKS1BP61024 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CKS1BP61024 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CKS1BP61024 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS1BP61024 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CKS1BP61024 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.32□□□□□ -0.12
CKS1BP61024 OR7E47P-201ENST00000546390 1422 ntBASIC14.32□□□□□ -0.12
CKS1BP61024 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CKS1BP61024 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS1BP61024 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS1BP61024 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CKS1BP61024 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.31□□□□□ -0.12
CKS1BP61024 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS1BP61024 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS1BP61024 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS1BP61024 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS1BP61024 TSPY9P-201ENST00000440215 945 ntBASIC14.31□□□□□ -0.12
CKS1BP61024 TSPY11P-201ENST00000442607 1045 ntBASIC14.31□□□□□ -0.12
CKS1BP61024 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS1BP61024 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CKS1BP61024 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.31□□□□□ -0.12
CKS1BP61024 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CKS1BP61024 AL499627.2-201ENST00000606283 725 ntBASIC14.31□□□□□ -0.12
CKS1BP61024 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS1BP61024 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS1BP61024 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CKS1BP61024 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CKS1BP61024 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.31□□□□□ -0.12
CKS1BP61024 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CKS1BP61024 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CKS1BP61024 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.31□□□□□ -0.12
CKS1BP61024 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.31□□□□□ -0.12
CKS1BP61024 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CKS1BP61024 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CKS1BP61024 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.3□□□□□ -0.12
CKS1BP61024 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.3□□□□□ -0.12
CKS1BP61024 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CKS1BP61024 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CKS1BP61024 AL117332.1-201ENST00000622628 974 ntBASIC14.3□□□□□ -0.12
CKS1BP61024 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.3□□□□□ -0.12
CKS1BP61024 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CKS1BP61024 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.3□□□□□ -0.12
CKS1BP61024 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.3□□□□□ -0.12
CKS1BP61024 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.3□□□□□ -0.12
CKS1BP61024 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
CKS1BP61024 AL139384.1-201ENST00000612143 3047 ntBASIC14.3□□□□□ -0.12
CKS1BP61024 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CKS1BP61024 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.29□□□□□ -0.12
CKS1BP61024 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CKS1BP61024 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 AC018445.3-201ENST00000624177 1945 ntBASIC14.29□□□□□ -0.12
CKS1BP61024 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.29□□□□□ -0.12
CKS1BP61024 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.29□□□□□ -0.12
CKS1BP61024 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.29□□□□□ -0.12
CKS1BP61024 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CKS1BP61024 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 AC079089.2-201ENST00000531211 1277 ntBASIC14.29□□□□□ -0.12
CKS1BP61024 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.29□□□□□ -0.12
CKS1BP61024 AC087239.1-201ENST00000622671 572 ntBASIC14.29□□□□□ -0.12
CKS1BP61024 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CKS1BP61024 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.29□□□□□ -0.12
CKS1BP61024 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms