Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SPCS3P61009 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPCS3P61009 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.67■□□□□ 0.26
SPCS3P61009 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SPCS3P61009 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPCS3P61009 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.67■□□□□ 0.26
SPCS3P61009 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPCS3P61009 IGHV3-19-201ENST00000521488 291 ntBASIC16.67■□□□□ 0.26
SPCS3P61009 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.67■□□□□ 0.26
SPCS3P61009 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SPCS3P61009 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.67■□□□□ 0.26
SPCS3P61009 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SPCS3P61009 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPCS3P61009 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPCS3P61009 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPCS3P61009 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.67■□□□□ 0.26
SPCS3P61009 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SPCS3P61009 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
SPCS3P61009 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SPCS3P61009 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.67■□□□□ 0.26
SPCS3P61009 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.66■□□□□ 0.26
SPCS3P61009 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 MIR4767-201ENST00000582827 78 ntBASIC16.66■□□□□ 0.26
SPCS3P61009 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.66■□□□□ 0.26
SPCS3P61009 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.66■□□□□ 0.26
SPCS3P61009 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SPCS3P61009 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SPCS3P61009 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SPCS3P61009 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPCS3P61009 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SPCS3P61009 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.65■□□□□ 0.26
SPCS3P61009 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SPCS3P61009 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.65■□□□□ 0.26
SPCS3P61009 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.65■□□□□ 0.26
SPCS3P61009 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.65■□□□□ 0.26
SPCS3P61009 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.65■□□□□ 0.26
SPCS3P61009 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.65■□□□□ 0.26
SPCS3P61009 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.65■□□□□ 0.26
SPCS3P61009 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPCS3P61009 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
SPCS3P61009 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.26
SPCS3P61009 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SPCS3P61009 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.64■□□□□ 0.26
SPCS3P61009 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.64■□□□□ 0.26
SPCS3P61009 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SPCS3P61009 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPCS3P61009 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPCS3P61009 AC005224.4-201ENST00000583262 1652 ntBASIC16.64■□□□□ 0.25
SPCS3P61009 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPCS3P61009 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPCS3P61009 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SPCS3P61009 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.63■□□□□ 0.25
SPCS3P61009 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SPCS3P61009 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SPCS3P61009 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.63■□□□□ 0.25
SPCS3P61009 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPCS3P61009 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.63■□□□□ 0.25
SPCS3P61009 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPCS3P61009 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPCS3P61009 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPCS3P61009 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.63■□□□□ 0.25
SPCS3P61009 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SPCS3P61009 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.63■□□□□ 0.25
SPCS3P61009 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SPCS3P61009 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.63■□□□□ 0.25
SPCS3P61009 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPCS3P61009 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPCS3P61009 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms