Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.33■□□□□ 0.05
CMC4P56277 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CMC4P56277 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CMC4P56277 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CMC4P56277 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.33■□□□□ 0.05
CMC4P56277 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CMC4P56277 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CMC4P56277 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CMC4P56277 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CMC4P56277 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.33■□□□□ 0.04
CMC4P56277 MCRIP2P1-201ENST00000394346 511 ntBASIC15.33■□□□□ 0.04
CMC4P56277 SLC29A4P1-201ENST00000398760 971 ntBASIC15.33■□□□□ 0.04
CMC4P56277 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.33■□□□□ 0.04
CMC4P56277 CYP2T1P-201ENST00000432607 1285 ntBASIC15.33■□□□□ 0.04
CMC4P56277 AC090192.1-201ENST00000517740 490 ntBASIC15.33■□□□□ 0.04
CMC4P56277 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.33■□□□□ 0.04
CMC4P56277 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.33■□□□□ 0.04
CMC4P56277 RAP2CP1-201ENST00000605103 478 ntBASIC15.33■□□□□ 0.04
CMC4P56277 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.33■□□□□ 0.04
CMC4P56277 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CMC4P56277 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CMC4P56277 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CMC4P56277 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CMC4P56277 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CMC4P56277 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CMC4P56277 FEM1AP4-201ENST00000443167 1987 ntBASIC15.33■□□□□ 0.04
CMC4P56277 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CMC4P56277 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CMC4P56277 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CMC4P56277 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CMC4P56277 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.32■□□□□ 0.04
CMC4P56277 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CMC4P56277 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CMC4P56277 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CMC4P56277 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.32■□□□□ 0.04
CMC4P56277 GPX1P1-201ENST00000388829 606 ntBASIC15.32■□□□□ 0.04
CMC4P56277 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.32■□□□□ 0.04
CMC4P56277 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.32■□□□□ 0.04
CMC4P56277 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.32■□□□□ 0.04
CMC4P56277 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.32■□□□□ 0.04
CMC4P56277 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CMC4P56277 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CMC4P56277 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CMC4P56277 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CMC4P56277 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CMC4P56277 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CMC4P56277 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CMC4P56277 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CMC4P56277 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CMC4P56277 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMC4P56277 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMC4P56277 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMC4P56277 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMC4P56277 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.31■□□□□ 0.04
CMC4P56277 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CMC4P56277 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMC4P56277 MIR663A-201ENST00000385250 93 ntBASIC15.31■□□□□ 0.04
CMC4P56277 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
CMC4P56277 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.31■□□□□ 0.04
CMC4P56277 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CMC4P56277 AC105036.2-201ENST00000569468 176 ntBASIC15.31■□□□□ 0.04
CMC4P56277 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.31■□□□□ 0.04
CMC4P56277 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMC4P56277 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CMC4P56277 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.31■□□□□ 0.04
CMC4P56277 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.31■□□□□ 0.04
CMC4P56277 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMC4P56277 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMC4P56277 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.31■□□□□ 0.04
CMC4P56277 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CMC4P56277 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMC4P56277 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMC4P56277 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CMC4P56277 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMC4P56277 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMC4P56277 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMC4P56277 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CMC4P56277 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CMC4P56277 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMC4P56277 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CMC4P56277 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CMC4P56277 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMC4P56277 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.3■□□□□ 0.04
CMC4P56277 NCF1B-203ENST00000435988 1254 ntBASIC15.3■□□□□ 0.04
CMC4P56277 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMC4P56277 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.3■□□□□ 0.04
CMC4P56277 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CMC4P56277 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
CMC4P56277 AC083906.2-201ENST00000511578 360 ntBASIC15.3■□□□□ 0.04
CMC4P56277 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CMC4P56277 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CMC4P56277 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CMC4P56277 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.3■□□□□ 0.04
CMC4P56277 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CMC4P56277 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CMC4P56277 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CMC4P56277 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMC4P56277 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMC4P56277 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CMC4P56277 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms