Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.19■□□□□ 0.98
PMS2P54278 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS2P54278 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS2P54278 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PMS2P54278 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS2P54278 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PMS2P54278 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PMS2P54278 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PMS2P54278 AC099791.1-201ENST00000416440 715 ntBASIC21.18■□□□□ 0.98
PMS2P54278 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.18■□□□□ 0.98
PMS2P54278 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.18■□□□□ 0.98
PMS2P54278 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PMS2P54278 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PMS2P54278 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PMS2P54278 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PMS2P54278 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PMS2P54278 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.18■□□□□ 0.98
PMS2P54278 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PMS2P54278 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.17■□□□□ 0.98
PMS2P54278 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS2P54278 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS2P54278 IRS3P-201ENST00000223076 1006 ntBASIC21.17■□□□□ 0.98
PMS2P54278 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS2P54278 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.17■□□□□ 0.98
PMS2P54278 AL162430.1-201ENST00000480705 870 ntBASIC21.17■□□□□ 0.98
PMS2P54278 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.17■□□□□ 0.98
PMS2P54278 SMUG1P1-201ENST00000590640 811 ntBASIC21.17■□□□□ 0.98
PMS2P54278 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.17■□□□□ 0.98
PMS2P54278 AC136469.2-201ENST00000623944 1028 ntBASIC21.17■□□□□ 0.98
PMS2P54278 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PMS2P54278 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.17■□□□□ 0.98
PMS2P54278 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PMS2P54278 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS2P54278 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS2P54278 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.17■□□□□ 0.98
PMS2P54278 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS2P54278 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS2P54278 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
PMS2P54278 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMS2P54278 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PMS2P54278 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMS2P54278 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.16■□□□□ 0.98
PMS2P54278 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.16■□□□□ 0.98
PMS2P54278 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMS2P54278 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.16■□□□□ 0.98
PMS2P54278 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.16■□□□□ 0.98
PMS2P54278 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMS2P54278 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PMS2P54278 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMS2P54278 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMS2P54278 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PMS2P54278 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PMS2P54278 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PMS2P54278 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS2P54278 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS2P54278 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS2P54278 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS2P54278 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PMS2P54278 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS2P54278 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PMS2P54278 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS2P54278 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PMS2P54278 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PMS2P54278 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS2P54278 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.15■□□□□ 0.98
PMS2P54278 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS2P54278 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.15■□□□□ 0.98
PMS2P54278 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS2P54278 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.15■□□□□ 0.98
PMS2P54278 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PMS2P54278 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.15■□□□□ 0.98
PMS2P54278 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
PMS2P54278 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
PMS2P54278 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PMS2P54278 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PMS2P54278 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMS2P54278 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PMS2P54278 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PMS2P54278 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.14■□□□□ 0.97
PMS2P54278 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.14■□□□□ 0.97
PMS2P54278 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PMS2P54278 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PMS2P54278 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.14■□□□□ 0.97
PMS2P54278 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.14■□□□□ 0.97
PMS2P54278 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PMS2P54278 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMS2P54278 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMS2P54278 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.14■□□□□ 0.97
PMS2P54278 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMS2P54278 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMS2P54278 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMS2P54278 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PMS2P54278 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PMS2P54278 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS2P54278 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PMS2P54278 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS2P54278 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS2P54278 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PMS2P54278 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS2P54278 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms