Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
PDX1P52945 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDX1P52945 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDX1P52945 AL596275.1-201ENST00000423464 877 ntBASIC19.99■□□□□ 0.79
PDX1P52945 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.99■□□□□ 0.79
PDX1P52945 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.99■□□□□ 0.79
PDX1P52945 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.99■□□□□ 0.79
PDX1P52945 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDX1P52945 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PDX1P52945 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
PDX1P52945 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.98■□□□□ 0.79
PDX1P52945 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDX1P52945 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PDX1P52945 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.98■□□□□ 0.79
PDX1P52945 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.98■□□□□ 0.79
PDX1P52945 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.98■□□□□ 0.79
PDX1P52945 AC008403.3-201ENST00000598924 454 ntBASIC19.98■□□□□ 0.79
PDX1P52945 AC100791.3-201ENST00000617619 330 ntBASIC19.98■□□□□ 0.79
PDX1P52945 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDX1P52945 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDX1P52945 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.98■□□□□ 0.79
PDX1P52945 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
PDX1P52945 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
PDX1P52945 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDX1P52945 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDX1P52945 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDX1P52945 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.97■□□□□ 0.79
PDX1P52945 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDX1P52945 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.97■□□□□ 0.79
PDX1P52945 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDX1P52945 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PDX1P52945 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDX1P52945 AC245052.3-201ENST00000450182 901 ntBASIC19.97■□□□□ 0.79
PDX1P52945 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.97■□□□□ 0.79
PDX1P52945 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDX1P52945 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PDX1P52945 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.97■□□□□ 0.79
PDX1P52945 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.97■□□□□ 0.79
PDX1P52945 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PDX1P52945 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.97■□□□□ 0.79
PDX1P52945 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDX1P52945 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDX1P52945 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDX1P52945 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDX1P52945 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.96■□□□□ 0.79
PDX1P52945 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDX1P52945 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDX1P52945 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.96■□□□□ 0.79
PDX1P52945 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.96■□□□□ 0.79
PDX1P52945 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PDX1P52945 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PDX1P52945 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.96■□□□□ 0.79
PDX1P52945 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PDX1P52945 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDX1P52945 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.96■□□□□ 0.79
PDX1P52945 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.96■□□□□ 0.79
PDX1P52945 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDX1P52945 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PDX1P52945 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDX1P52945 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDX1P52945 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDX1P52945 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.95■□□□□ 0.78
PDX1P52945 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDX1P52945 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDX1P52945 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.95■□□□□ 0.78
PDX1P52945 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDX1P52945 AC060766.5-201ENST00000590539 871 ntBASIC19.95■□□□□ 0.78
PDX1P52945 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.95■□□□□ 0.78
PDX1P52945 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.95■□□□□ 0.78
PDX1P52945 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDX1P52945 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDX1P52945 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.95■□□□□ 0.78
PDX1P52945 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDX1P52945 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDX1P52945 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
PDX1P52945 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDX1P52945 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDX1P52945 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PDX1P52945 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDX1P52945 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDX1P52945 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
PDX1P52945 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDX1P52945 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PDX1P52945 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDX1P52945 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDX1P52945 CDV3P1-201ENST00000471403 739 ntBASIC19.94■□□□□ 0.78
PDX1P52945 RPS2P4-201ENST00000476944 856 ntBASIC19.94■□□□□ 0.78
PDX1P52945 UNC93B4-201ENST00000505679 747 ntBASIC19.94■□□□□ 0.78
PDX1P52945 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.94■□□□□ 0.78
PDX1P52945 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDX1P52945 HLA-B-256ENST00000639848 1089 ntBASIC19.94■□□□□ 0.78
PDX1P52945 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDX1P52945 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDX1P52945 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PDX1P52945 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDX1P52945 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PDX1P52945 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.93■□□□□ 0.78
PDX1P52945 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDX1P52945 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDX1P52945 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms