Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.02■□□□□ 0.48
HCFC1P51610 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC1P51610 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC1P51610 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC1P51610 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.02■□□□□ 0.48
HCFC1P51610 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.02■□□□□ 0.48
HCFC1P51610 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.02■□□□□ 0.48
HCFC1P51610 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
HCFC1P51610 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.02■□□□□ 0.48
HCFC1P51610 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC1P51610 AC080038.3-201ENST00000623346 1952 ntBASIC18.02■□□□□ 0.48
HCFC1P51610 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC1P51610 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.02■□□□□ 0.48
HCFC1P51610 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.02■□□□□ 0.48
HCFC1P51610 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.02■□□□□ 0.48
HCFC1P51610 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.02■□□□□ 0.48
HCFC1P51610 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HCFC1P51610 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.02■□□□□ 0.47
HCFC1P51610 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HCFC1P51610 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
HCFC1P51610 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.01■□□□□ 0.47
HCFC1P51610 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCFC1P51610 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.01■□□□□ 0.47
HCFC1P51610 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
HCFC1P51610 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.01■□□□□ 0.47
HCFC1P51610 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.01■□□□□ 0.47
HCFC1P51610 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.01■□□□□ 0.47
HCFC1P51610 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.01■□□□□ 0.47
HCFC1P51610 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HCFC1P51610 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCFC1P51610 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCFC1P51610 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCFC1P51610 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HCFC1P51610 AC116050.2-201ENST00000612102 1779 ntBASIC18.01■□□□□ 0.47
HCFC1P51610 CLDN5-201ENST00000403084 2357 ntBASIC18.01■□□□□ 0.47
HCFC1P51610 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCFC1P51610 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
HCFC1P51610 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HCFC1P51610 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.01■□□□□ 0.47
HCFC1P51610 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.01■□□□□ 0.47
HCFC1P51610 MTDHP1-201ENST00000605323 784 ntBASIC18.01■□□□□ 0.47
HCFC1P51610 AL356652.1-201ENST00000615962 565 ntBASIC18.01■□□□□ 0.47
HCFC1P51610 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
HCFC1P51610 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.01■□□□□ 0.47
HCFC1P51610 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCFC1P51610 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCFC1P51610 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18■□□□□ 0.47
HCFC1P51610 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HCFC1P51610 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18■□□□□ 0.47
HCFC1P51610 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18■□□□□ 0.47
HCFC1P51610 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HCFC1P51610 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18■□□□□ 0.47
HCFC1P51610 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HCFC1P51610 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HCFC1P51610 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HCFC1P51610 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HCFC1P51610 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HCFC1P51610 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HCFC1P51610 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18■□□□□ 0.47
HCFC1P51610 AC124016.1-201ENST00000609552 612 ntBASIC18■□□□□ 0.47
HCFC1P51610 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HCFC1P51610 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18■□□□□ 0.47
HCFC1P51610 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HCFC1P51610 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18■□□□□ 0.47
HCFC1P51610 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18■□□□□ 0.47
HCFC1P51610 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HCFC1P51610 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HCFC1P51610 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HCFC1P51610 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.99■□□□□ 0.47
HCFC1P51610 AC133681.1-201ENST00000465482 601 ntBASIC17.99■□□□□ 0.47
HCFC1P51610 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.99■□□□□ 0.47
HCFC1P51610 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.99■□□□□ 0.47
HCFC1P51610 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
HCFC1P51610 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HCFC1P51610 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
HCFC1P51610 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.99■□□□□ 0.47
HCFC1P51610 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HCFC1P51610 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCFC1P51610 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HCFC1P51610 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCFC1P51610 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCFC1P51610 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HCFC1P51610 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCFC1P51610 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
HCFC1P51610 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.99■□□□□ 0.47
HCFC1P51610 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HCFC1P51610 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCFC1P51610 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCFC1P51610 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HCFC1P51610 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCFC1P51610 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HCFC1P51610 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCFC1P51610 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCFC1P51610 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HCFC1P51610 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HCFC1P51610 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HCFC1P51610 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
HCFC1P51610 BX088651.1-201ENST00000540551 451 ntBASIC17.99■□□□□ 0.47
HCFC1P51610 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HCFC1P51610 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms