Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MECP2P51608 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
MECP2P51608 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MECP2P51608 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MECP2P51608 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MECP2P51608 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MECP2P51608 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MECP2P51608 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MECP2P51608 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MECP2P51608 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
MECP2P51608 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MECP2P51608 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MECP2P51608 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MECP2P51608 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.51■□□□□ 0.39
MECP2P51608 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.51■□□□□ 0.39
MECP2P51608 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.51■□□□□ 0.39
MECP2P51608 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MECP2P51608 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MECP2P51608 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MECP2P51608 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MECP2P51608 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MECP2P51608 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.5■□□□□ 0.39
MECP2P51608 AC009102.2-201ENST00000606772 1639 ntBASIC17.5■□□□□ 0.39
MECP2P51608 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MECP2P51608 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MECP2P51608 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MECP2P51608 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
MECP2P51608 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MECP2P51608 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
MECP2P51608 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
MECP2P51608 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
MECP2P51608 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MECP2P51608 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MECP2P51608 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MECP2P51608 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.5■□□□□ 0.39
MECP2P51608 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MECP2P51608 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.5■□□□□ 0.39
MECP2P51608 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MECP2P51608 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.5■□□□□ 0.39
MECP2P51608 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.5■□□□□ 0.39
MECP2P51608 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
MECP2P51608 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
MECP2P51608 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MECP2P51608 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.5■□□□□ 0.39
MECP2P51608 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MECP2P51608 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MECP2P51608 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
MECP2P51608 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MECP2P51608 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
MECP2P51608 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MECP2P51608 TCF3P1-201ENST00000423021 1937 ntBASIC17.49■□□□□ 0.39
MECP2P51608 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MECP2P51608 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
MECP2P51608 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MECP2P51608 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.49■□□□□ 0.39
MECP2P51608 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
MECP2P51608 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.49■□□□□ 0.39
MECP2P51608 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MECP2P51608 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MECP2P51608 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.49■□□□□ 0.39
MECP2P51608 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MECP2P51608 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MECP2P51608 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.49■□□□□ 0.39
MECP2P51608 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MECP2P51608 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.49■□□□□ 0.39
MECP2P51608 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MECP2P51608 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MECP2P51608 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MECP2P51608 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.48■□□□□ 0.39
MECP2P51608 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MECP2P51608 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.48■□□□□ 0.39
MECP2P51608 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MECP2P51608 AP000974.1-201ENST00000623909 2387 ntBASIC17.48■□□□□ 0.39
MECP2P51608 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
MECP2P51608 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MECP2P51608 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MECP2P51608 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
MECP2P51608 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MECP2P51608 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MECP2P51608 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MECP2P51608 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MECP2P51608 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
MECP2P51608 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MECP2P51608 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.47■□□□□ 0.39
MECP2P51608 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MECP2P51608 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
MECP2P51608 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MECP2P51608 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MECP2P51608 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MECP2P51608 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MECP2P51608 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.47■□□□□ 0.39
MECP2P51608 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MECP2P51608 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MECP2P51608 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.47■□□□□ 0.39
MECP2P51608 AL034346.1-201ENST00000568244 1277 ntBASIC17.47■□□□□ 0.39
MECP2P51608 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
MECP2P51608 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
MECP2P51608 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MECP2P51608 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
MECP2P51608 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms