Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB28P51157 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RAB28P51157 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RAB28P51157 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB28P51157 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB28P51157 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
RAB28P51157 SLC29A4P1-201ENST00000398760 971 ntBASIC19.89■□□□□ 0.77
RAB28P51157 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.89■□□□□ 0.77
RAB28P51157 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.89■□□□□ 0.77
RAB28P51157 HLA-L-209ENST00000420110 1011 ntBASIC19.89■□□□□ 0.77
RAB28P51157 GUSBP6-202ENST00000438529 1198 ntBASIC19.89■□□□□ 0.77
RAB28P51157 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB28P51157 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RAB28P51157 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RAB28P51157 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB28P51157 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RAB28P51157 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.89■□□□□ 0.77
RAB28P51157 AC104771.1-201ENST00000603335 964 ntBASIC19.89■□□□□ 0.77
RAB28P51157 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB28P51157 PLK5-205ENST00000642079 1969 ntBASIC19.89■□□□□ 0.77
RAB28P51157 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RAB28P51157 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB28P51157 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
RAB28P51157 CYP21A1P-202ENST00000354927 1481 ntBASIC19.88■□□□□ 0.77
RAB28P51157 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.88■□□□□ 0.77
RAB28P51157 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB28P51157 MCRIP2P1-201ENST00000394346 511 ntBASIC19.88■□□□□ 0.77
RAB28P51157 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.88■□□□□ 0.77
RAB28P51157 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.88■□□□□ 0.77
RAB28P51157 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RAB28P51157 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.88■□□□□ 0.77
RAB28P51157 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.88■□□□□ 0.77
RAB28P51157 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.88■□□□□ 0.77
RAB28P51157 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB28P51157 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB28P51157 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.88■□□□□ 0.77
RAB28P51157 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB28P51157 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB28P51157 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB28P51157 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB28P51157 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
RAB28P51157 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB28P51157 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RAB28P51157 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.87■□□□□ 0.77
RAB28P51157 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB28P51157 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB28P51157 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB28P51157 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB28P51157 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB28P51157 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB28P51157 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB28P51157 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RAB28P51157 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.87■□□□□ 0.77
RAB28P51157 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.87■□□□□ 0.77
RAB28P51157 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.87■□□□□ 0.77
RAB28P51157 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.87■□□□□ 0.77
RAB28P51157 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.87■□□□□ 0.77
RAB28P51157 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RAB28P51157 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB28P51157 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB28P51157 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RAB28P51157 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.87■□□□□ 0.77
RAB28P51157 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB28P51157 AL137060.1-201ENST00000618151 2648 ntBASIC19.87■□□□□ 0.77
RAB28P51157 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB28P51157 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB28P51157 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB28P51157 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB28P51157 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB28P51157 AC027702.1-201ENST00000563810 1770 ntBASIC19.86■□□□□ 0.77
RAB28P51157 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB28P51157 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB28P51157 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB28P51157 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.86■□□□□ 0.77
RAB28P51157 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB28P51157 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.86■□□□□ 0.77
RAB28P51157 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.86■□□□□ 0.77
RAB28P51157 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.86■□□□□ 0.77
RAB28P51157 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RAB28P51157 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.86■□□□□ 0.77
RAB28P51157 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB28P51157 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB28P51157 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RAB28P51157 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
RAB28P51157 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB28P51157 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB28P51157 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB28P51157 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB28P51157 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RAB28P51157 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.85■□□□□ 0.77
RAB28P51157 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.85■□□□□ 0.77
RAB28P51157 CYP2T3P-201ENST00000601990 817 ntBASIC19.85■□□□□ 0.77
RAB28P51157 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.85■□□□□ 0.77
RAB28P51157 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RAB28P51157 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RAB28P51157 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.85■□□□□ 0.77
RAB28P51157 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB28P51157 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB28P51157 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RAB28P51157 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms