Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 YGL239CYGL239C 315 nt4.6□□□□□ -1.67
NUP42P49686 YNL010WYNL010W 726 nt4.6□□□□□ -1.67
NUP42P49686 CCM1YGR150C 2595 nt4.6□□□□□ -1.67
NUP42P49686 SEC15YGL233W 2733 nt4.6□□□□□ -1.67
NUP42P49686 COA4YLR218C 453 nt4.59□□□□□ -1.67
NUP42P49686 NUP2YLR335W 2163 nt4.59□□□□□ -1.67
NUP42P49686 YOL131WYOL131W 327 nt4.59□□□□□ -1.67
NUP42P49686 RPS7AYOR096W 573 nt4.59□□□□□ -1.67
NUP42P49686 snR191snR191 274 nt4.59□□□□□ -1.67
NUP42P49686 VPS64YDR200C 1815 nt4.58□□□□□ -1.68
NUP42P49686 YKU70YMR284W 1809 nt4.58□□□□□ -1.68
NUP42P49686 YIL166CYIL166C 1629 nt4.58□□□□□ -1.68
NUP42P49686 CDC24YAL041W 2565 nt4.58□□□□□ -1.68
NUP42P49686 YEL068CYEL068C 333 nt4.58□□□□□ -1.68
NUP42P49686 YMR252CYMR252C 405 nt4.58□□□□□ -1.68
NUP42P49686 RSM19YNR037C 276 nt4.58□□□□□ -1.68
NUP42P49686 VTC4YJL012C 2166 nt4.58□□□□□ -1.68
NUP42P49686 COX23YHR116W 456 nt4.57□□□□□ -1.68
NUP42P49686 SUP2tY(GUA)D 75 nt4.57□□□□□ -1.68
NUP42P49686 SUP11tY(GUA)F1 75 nt4.57□□□□□ -1.68
NUP42P49686 SUP6tY(GUA)F2 75 nt4.57□□□□□ -1.68
NUP42P49686 SUP7tY(GUA)J1 75 nt4.57□□□□□ -1.68
NUP42P49686 SUP4tY(GUA)J2 75 nt4.57□□□□□ -1.68
NUP42P49686 SUP5tY(GUA)M1 75 nt4.57□□□□□ -1.68
NUP42P49686 SUP8tY(GUA)M2 75 nt4.57□□□□□ -1.68
NUP42P49686 SUP3tY(GUA)O 75 nt4.57□□□□□ -1.68
NUP42P49686 YJL135WYJL135W 318 nt4.57□□□□□ -1.68
NUP42P49686 YPL025CYPL025C 558 nt4.57□□□□□ -1.68
NUP42P49686 ECM25YJL201W 1800 nt4.57□□□□□ -1.68
NUP42P49686 PDR18YNR070W 4002 nt4.57□□□□□ -1.68
NUP42P49686 GSC2YGR032W 5688 nt4.57□□□□□ -1.68
NUP42P49686 YJL181WYJL181W 1836 nt4.56□□□□□ -1.68
NUP42P49686 RPS27AYKL156W 249 nt4.56□□□□□ -1.68
NUP42P49686 YLR140WYLR140W 327 nt4.56□□□□□ -1.68
NUP42P49686 YNL057WYNL057W 333 nt4.56□□□□□ -1.68
NUP42P49686 YPR146CYPR146C 330 nt4.56□□□□□ -1.68
NUP42P49686 snR48snR48 113 nt4.56□□□□□ -1.68
NUP42P49686 SPT16YGL207W 3108 nt4.56□□□□□ -1.68
NUP42P49686 TOP1YOL006C 2310 nt4.56□□□□□ -1.68
NUP42P49686 EMC1YCL045C 2283 nt4.56□□□□□ -1.68
NUP42P49686 JEN1YKL217W 1851 nt4.56□□□□□ -1.68
NUP42P49686 MSH2YOL090W 2895 nt4.55□□□□□ -1.68
NUP42P49686 FLO10YKR102W 3510 nt4.55□□□□□ -1.68
NUP42P49686 TRS85YDR108W 2097 nt4.55□□□□□ -1.68
NUP42P49686 PGM2YMR105C 1710 nt4.55□□□□□ -1.68
NUP42P49686 TCP1YDR212W 1680 nt4.55□□□□□ -1.68
NUP42P49686 APC11YDL008W 498 nt4.55□□□□□ -1.68
NUP42P49686 RPS17BYDR447C 411 nt4.55□□□□□ -1.68
NUP42P49686 YEL067CYEL067C 588 nt4.55□□□□□ -1.68
NUP42P49686 TRM7YBR061C 933 nt4.55□□□□□ -1.68
NUP42P49686 SOK2YMR016C 2358 nt4.55□□□□□ -1.68
NUP42P49686 YRM1YOR172W 2361 nt4.54□□□□□ -1.68
NUP42P49686 YCL065WYCL065W 369 nt4.54□□□□□ -1.68
NUP42P49686 YGR164WYGR164W 336 nt4.54□□□□□ -1.68
NUP42P49686 YHR213W-AYHR213W-A 234 nt4.54□□□□□ -1.68
NUP42P49686 RPL36AYMR194W 303 nt4.54□□□□□ -1.68
NUP42P49686 HHT1YBR010W 411 nt4.54□□□□□ -1.68
NUP42P49686 BNI4YNL233W 2679 nt4.53□□□□□ -1.68
NUP42P49686 YPR014CYPR014C 330 nt4.53□□□□□ -1.68
NUP42P49686 YBR178WYBR178W 375 nt4.53□□□□□ -1.68
NUP42P49686 SPT10YJL127C 1923 nt4.52□□□□□ -1.69
NUP42P49686 snR60snR60 104 nt4.52□□□□□ -1.69
NUP42P49686 PMP3YDR276C 168 nt4.52□□□□□ -1.69
NUP42P49686 YEL032C-AYEL032C-A 162 nt4.52□□□□□ -1.69
NUP42P49686 OLI1Q0130 231 nt4.52□□□□□ -1.69
NUP42P49686 SOD1YJR104C 465 nt4.52□□□□□ -1.69
NUP42P49686 YPR063CYPR063C 423 nt4.52□□□□□ -1.69
NUP42P49686 FOX2YKR009C 2703 nt4.52□□□□□ -1.69
NUP42P49686 SEG1YMR086W 2883 nt4.52□□□□□ -1.69
NUP42P49686 YDR261C-DYDR261C-D 4815 nt4.52□□□□□ -1.69
NUP42P49686 REG1YDR028C 3045 nt4.52□□□□□ -1.69
NUP42P49686 OSH2YDL019C 3852 nt4.52□□□□□ -1.69
NUP42P49686 RIA1YNL163C 3333 nt4.52□□□□□ -1.69
NUP42P49686 MCD4YKL165C 2760 nt4.52□□□□□ -1.69
NUP42P49686 SSK22YCR073C 3996 nt4.52□□□□□ -1.69
NUP42P49686 PDC1YLR044C 1692 nt4.51□□□□□ -1.69
NUP42P49686 JHD2YJR119C 2187 nt4.51□□□□□ -1.69
NUP42P49686 SDH4YDR178W 546 nt4.51□□□□□ -1.69
NUP42P49686 YER121WYER121W 345 nt4.51□□□□□ -1.69
NUP42P49686 AYR1YIL124W 894 nt4.51□□□□□ -1.69
NUP42P49686 GON7YJL184W 372 nt4.51□□□□□ -1.69
NUP42P49686 YAL047W-AYAL047W-A 330 nt4.51□□□□□ -1.69
NUP42P49686 TPS3YMR261C 3165 nt4.51□□□□□ -1.69
NUP42P49686 UBX7YBR273C 1311 nt4.5□□□□□ -1.69
NUP42P49686 YHL041WYHL041W 450 nt4.5□□□□□ -1.69
NUP42P49686 SAR1YPL218W 573 nt4.5□□□□□ -1.69
NUP42P49686 PHO81YGR233C 3537 nt4.5□□□□□ -1.69
NUP42P49686 USA1YML029W 2517 nt4.49□□□□□ -1.69
NUP42P49686 COG3YER157W 2406 nt4.49□□□□□ -1.69
NUP42P49686 NAG1YGR031C-A 492 nt4.49□□□□□ -1.69
NUP42P49686 YIL059CYIL059C 366 nt4.49□□□□□ -1.69
NUP42P49686 DOA4YDR069C 2781 nt4.48□□□□□ -1.69
NUP42P49686 HSF1YGL073W 2502 nt4.48□□□□□ -1.69
NUP42P49686 VTH1YIL173W 4650 nt4.48□□□□□ -1.69
NUP42P49686 VTH2YJL222W 4650 nt4.48□□□□□ -1.69
NUP42P49686 YGR250CYGR250C 2346 nt4.48□□□□□ -1.69
NUP42P49686 RBK1YCR036W 1002 nt4.48□□□□□ -1.69
NUP42P49686 tF(GAA)QtF(GAA)Q 75 nt4.48□□□□□ -1.69
NUP42P49686 GCG1YER163C 699 nt4.48□□□□□ -1.69
NUP42P49686 YER187WYER187W 426 nt4.48□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 40.5 ms