Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RXRGP48443 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RXRGP48443 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RXRGP48443 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RXRGP48443 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RXRGP48443 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RXRGP48443 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.54■□□□□ 0.88
RXRGP48443 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RXRGP48443 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RXRGP48443 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RXRGP48443 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.54■□□□□ 0.88
RXRGP48443 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RXRGP48443 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RXRGP48443 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RXRGP48443 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
RXRGP48443 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RXRGP48443 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RXRGP48443 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
RXRGP48443 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RXRGP48443 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.53■□□□□ 0.88
RXRGP48443 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.53■□□□□ 0.88
RXRGP48443 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
RXRGP48443 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RXRGP48443 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.53■□□□□ 0.88
RXRGP48443 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.53■□□□□ 0.88
RXRGP48443 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RXRGP48443 FAM21FP-204ENST00000608637 956 ntBASIC20.53■□□□□ 0.88
RXRGP48443 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RXRGP48443 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RXRGP48443 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RXRGP48443 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.53■□□□□ 0.88
RXRGP48443 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.53■□□□□ 0.88
RXRGP48443 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RXRGP48443 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RXRGP48443 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
RXRGP48443 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RXRGP48443 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RXRGP48443 AC073130.3-201ENST00000624389 2278 ntBASIC20.52■□□□□ 0.88
RXRGP48443 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RXRGP48443 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.52■□□□□ 0.88
RXRGP48443 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RXRGP48443 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RXRGP48443 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RXRGP48443 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RXRGP48443 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RXRGP48443 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
RXRGP48443 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.52■□□□□ 0.88
RXRGP48443 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.52■□□□□ 0.88
RXRGP48443 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RXRGP48443 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.52■□□□□ 0.88
RXRGP48443 AC100791.3-201ENST00000617619 330 ntBASIC20.52■□□□□ 0.88
RXRGP48443 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.52■□□□□ 0.88
RXRGP48443 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RXRGP48443 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RXRGP48443 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.52■□□□□ 0.88
RXRGP48443 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RXRGP48443 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRGP48443 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.51■□□□□ 0.87
RXRGP48443 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RXRGP48443 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.51■□□□□ 0.87
RXRGP48443 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.51■□□□□ 0.87
RXRGP48443 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
RXRGP48443 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RXRGP48443 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRGP48443 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RXRGP48443 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRGP48443 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RXRGP48443 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RXRGP48443 LSM12P1-201ENST00000411836 588 ntBASIC20.51■□□□□ 0.87
RXRGP48443 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.51■□□□□ 0.87
RXRGP48443 AC091799.1-201ENST00000422823 811 ntBASIC20.51■□□□□ 0.87
RXRGP48443 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.51■□□□□ 0.87
RXRGP48443 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.51■□□□□ 0.87
RXRGP48443 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RXRGP48443 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.51■□□□□ 0.87
RXRGP48443 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.51■□□□□ 0.87
RXRGP48443 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.51■□□□□ 0.87
RXRGP48443 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRGP48443 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.51■□□□□ 0.87
RXRGP48443 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRGP48443 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRGP48443 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.51■□□□□ 0.87
RXRGP48443 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.5■□□□□ 0.87
RXRGP48443 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RXRGP48443 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RXRGP48443 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RXRGP48443 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.5■□□□□ 0.87
RXRGP48443 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RXRGP48443 GCSHP5-201ENST00000443090 522 ntBASIC20.5■□□□□ 0.87
RXRGP48443 AC098590.1-201ENST00000468126 897 ntBASIC20.5■□□□□ 0.87
RXRGP48443 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.5■□□□□ 0.87
RXRGP48443 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.5■□□□□ 0.87
RXRGP48443 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RXRGP48443 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RXRGP48443 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RXRGP48443 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RXRGP48443 AC080038.3-201ENST00000623346 1952 ntBASIC20.5■□□□□ 0.87
RXRGP48443 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RXRGP48443 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RXRGP48443 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms