Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YPK1YKL126W 2043 nt2.48□□□□□ -2.01
SSN8P47821 NUM1YDR150W 8247 nt2.48□□□□□ -2.01
SSN8P47821 YDR199WYDR199W 366 nt2.48□□□□□ -2.01
SSN8P47821 MET32YDR253C 576 nt2.48□□□□□ -2.01
SSN8P47821 OTU2YHL013C 924 nt2.48□□□□□ -2.01
SSN8P47821 ALG14YBR070C 714 nt2.48□□□□□ -2.01
SSN8P47821 SSF1YHR066W 1362 nt2.48□□□□□ -2.01
SSN8P47821 ILS1YBL076C 3219 nt2.47□□□□□ -2.01
SSN8P47821 SPR3YGR059W 1539 nt2.47□□□□□ -2.01
SSN8P47821 UBP16YPL072W 1500 nt2.47□□□□□ -2.01
SSN8P47821 YCR001WYCR001W 315 nt2.47□□□□□ -2.01
SSN8P47821 APC11YDL008W 498 nt2.47□□□□□ -2.01
SSN8P47821 RPL9AYGL147C 576 nt2.47□□□□□ -2.01
SSN8P47821 YLR379WYLR379W 375 nt2.47□□□□□ -2.01
SSN8P47821 SMA2YML066C 1110 nt2.47□□□□□ -2.01
SSN8P47821 YOL150CYOL150C 312 nt2.47□□□□□ -2.01
SSN8P47821 YPR050CYPR050C 414 nt2.47□□□□□ -2.01
SSN8P47821 YBR085C-AYBR085C-A 258 nt2.47□□□□□ -2.01
SSN8P47821 MLH1YMR167W 2310 nt2.47□□□□□ -2.01
SSN8P47821 SIN3YOL004W 4611 nt2.46□□□□□ -2.02
SSN8P47821 SRO77YBL106C 3033 nt2.46□□□□□ -2.02
SSN8P47821 YIL080WYIL080W 4722 nt2.46□□□□□ -2.02
SSN8P47821 YME2YMR302C 2553 nt2.46□□□□□ -2.02
SSN8P47821 AST2YER101C 1293 nt2.46□□□□□ -2.02
SSN8P47821 YGL015CYGL015C 393 nt2.46□□□□□ -2.02
SSN8P47821 ERV1YGR029W 570 nt2.46□□□□□ -2.02
SSN8P47821 AFB1YLR040C 675 nt2.46□□□□□ -2.02
SSN8P47821 GPI15YNL038W 690 nt2.46□□□□□ -2.02
SSN8P47821 YNL146C-AYNL146C-A 195 nt2.46□□□□□ -2.02
SSN8P47821 RRD2YPL152W 1077 nt2.46□□□□□ -2.02
SSN8P47821 YPR177CYPR177C 372 nt2.46□□□□□ -2.02
SSN8P47821 MSB2YGR014W 3921 nt2.46□□□□□ -2.02
SSN8P47821 YIL082W-AYIL082W-A 4497 nt2.46□□□□□ -2.02
SSN8P47821 ESL2YKR096W 3588 nt2.45□□□□□ -2.02
SSN8P47821 TIF35YDR429C 825 nt2.45□□□□□ -2.02
SSN8P47821 YER038W-AYER038W-A 381 nt2.45□□□□□ -2.02
SSN8P47821 YER084W-AYER084W-A 513 nt2.45□□□□□ -2.02
SSN8P47821 SPO13YHR014W 876 nt2.45□□□□□ -2.02
SSN8P47821 YHC1YLR298C 696 nt2.45□□□□□ -2.02
SSN8P47821 HRI1YLR301W 735 nt2.45□□□□□ -2.02
SSN8P47821 YMR316C-AYMR316C-A 312 nt2.45□□□□□ -2.02
SSN8P47821 RPL33AYPL143W 324 nt2.45□□□□□ -2.02
SSN8P47821 SSN2YDR443C 4263 nt2.45□□□□□ -2.02
SSN8P47821 GYP7YDL234C 2241 nt2.45□□□□□ -2.02
SSN8P47821 BI4Q0120 1917 nt2.44□□□□□ -2.02
SSN8P47821 POM152YMR129W 4014 nt2.44□□□□□ -2.02
SSN8P47821 COX13YGL191W 390 nt2.44□□□□□ -2.02
SSN8P47821 RPL8BYLL045C 771 nt2.44□□□□□ -2.02
SSN8P47821 TOM22YNL131W 459 nt2.44□□□□□ -2.02
SSN8P47821 SPC29YPL124W 762 nt2.44□□□□□ -2.02
SSN8P47821 SVS1YPL163C 783 nt2.44□□□□□ -2.02
SSN8P47821 TCB2YNL087W 3537 nt2.43□□□□□ -2.02
SSN8P47821 TOR1YJR066W 7413 nt2.43□□□□□ -2.02
SSN8P47821 RPL23BYER117W 414 nt2.43□□□□□ -2.02
SSN8P47821 TIM10YHR005C-A 282 nt2.43□□□□□ -2.02
SSN8P47821 YIL174WYIL174W 228 nt2.43□□□□□ -2.02
SSN8P47821 YJL222W-AYJL222W-A 228 nt2.43□□□□□ -2.02
SSN8P47821 PEX17YNL214W 600 nt2.43□□□□□ -2.02
SSN8P47821 PEP12YOR036W 867 nt2.43□□□□□ -2.02
SSN8P47821 IRC16YPR038W 360 nt2.43□□□□□ -2.02
SSN8P47821 SSF2YDR312W 1362 nt2.43□□□□□ -2.02
SSN8P47821 MES1YGR264C 2256 nt2.43□□□□□ -2.02
SSN8P47821 SUL1YBR294W 2580 nt2.43□□□□□ -2.02
SSN8P47821 DBP10YDL031W 2988 nt2.43□□□□□ -2.02
SSN8P47821 NMA111YNL123W 2994 nt2.42□□□□□ -2.02
SSN8P47821 ASM4YDL088C 1587 nt2.42□□□□□ -2.02
SSN8P47821 YMR31YFR049W 372 nt2.42□□□□□ -2.02
SSN8P47821 YGL063C-AYGL063C-A 150 nt2.42□□□□□ -2.02
SSN8P47821 RTS3YGR161C 792 nt2.42□□□□□ -2.02
SSN8P47821 YAP3YHL009C 993 nt2.42□□□□□ -2.02
SSN8P47821 YKR033CYKR033C 426 nt2.42□□□□□ -2.02
SSN8P47821 ARV1YLR242C 966 nt2.42□□□□□ -2.02
SSN8P47821 CTK3YML112W 891 nt2.42□□□□□ -2.02
SSN8P47821 DDR48YMR173W 1293 nt2.42□□□□□ -2.02
SSN8P47821 ATX2YOR079C 942 nt2.42□□□□□ -2.02
SSN8P47821 OST2YOR103C 393 nt2.42□□□□□ -2.02
SSN8P47821 YPL216WYPL216W 3309 nt2.42□□□□□ -2.02
SSN8P47821 FIR1YER032W 2631 nt2.42□□□□□ -2.02
SSN8P47821 DUG2YBR281C 2637 nt2.42□□□□□ -2.02
SSN8P47821 RNR4YGR180C 1038 nt2.41□□□□□ -2.02
SSN8P47821 YLR012CYLR012C 300 nt2.41□□□□□ -2.02
SSN8P47821 RPB5YBR154C 648 nt2.41□□□□□ -2.02
SSN8P47821 CSF1YLR087C 8877 nt2.41□□□□□ -2.02
SSN8P47821 HNT1YDL125C 477 nt2.4□□□□□ -2.03
SSN8P47821 YDR193WYDR193W 399 nt2.4□□□□□ -2.03
SSN8P47821 HMF1YER057C 390 nt2.4□□□□□ -2.03
SSN8P47821 RAD6YGL058W 519 nt2.4□□□□□ -2.03
SSN8P47821 BET3YKR068C 582 nt2.4□□□□□ -2.03
SSN8P47821 SYM1YLR251W 594 nt2.4□□□□□ -2.03
SSN8P47821 PBI2YNL015W 228 nt2.4□□□□□ -2.03
SSN8P47821 KRE33YNL132W 3171 nt2.4□□□□□ -2.03
SSN8P47821 YJL181WYJL181W 1836 nt2.4□□□□□ -2.03
SSN8P47821 VAC8YEL013W 1737 nt2.39□□□□□ -2.03
SSN8P47821 RPL16AYIL133C 600 nt2.39□□□□□ -2.03
SSN8P47821 YKL068W-AYKL068W-A 237 nt2.39□□□□□ -2.03
SSN8P47821 ESF2YNR054C 951 nt2.39□□□□□ -2.03
SSN8P47821 TOA1YOR194C 861 nt2.39□□□□□ -2.03
SSN8P47821 NPR3YHL023C 3441 nt2.39□□□□□ -2.03
SSN8P47821 COG3YER157W 2406 nt2.39□□□□□ -2.03
SSN8P47821 RLI1YDR091C 1827 nt2.38□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 28.8 ms