Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MTHFRP42898 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MTHFRP42898 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
MTHFRP42898 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.59■■□□□ 1.05
MTHFRP42898 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
MTHFRP42898 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
MTHFRP42898 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MTHFRP42898 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.58■■□□□ 1.05
MTHFRP42898 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MTHFRP42898 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
MTHFRP42898 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MTHFRP42898 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.58■■□□□ 1.05
MTHFRP42898 AC133681.1-201ENST00000465482 601 ntBASIC21.58■■□□□ 1.05
MTHFRP42898 KRT18P21-201ENST00000515767 1272 ntBASIC21.58■■□□□ 1.05
MTHFRP42898 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.58■■□□□ 1.05
MTHFRP42898 MTDHP1-201ENST00000605323 784 ntBASIC21.58■■□□□ 1.05
MTHFRP42898 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MTHFRP42898 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MTHFRP42898 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.58■■□□□ 1.05
MTHFRP42898 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MTHFRP42898 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
MTHFRP42898 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MTHFRP42898 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
MTHFRP42898 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.57■■□□□ 1.04
MTHFRP42898 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MTHFRP42898 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MTHFRP42898 AL135905.2-201ENST00000584934 1404 ntBASIC21.57■■□□□ 1.04
MTHFRP42898 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MTHFRP42898 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MTHFRP42898 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
MTHFRP42898 TSPY7P-201ENST00000431358 1114 ntBASIC21.57■■□□□ 1.04
MTHFRP42898 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
MTHFRP42898 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MTHFRP42898 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MTHFRP42898 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.57■■□□□ 1.04
MTHFRP42898 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
MTHFRP42898 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
MTHFRP42898 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.57■■□□□ 1.04
MTHFRP42898 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
MTHFRP42898 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.57■■□□□ 1.04
MTHFRP42898 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MTHFRP42898 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MTHFRP42898 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MTHFRP42898 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
MTHFRP42898 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.57■■□□□ 1.04
MTHFRP42898 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MTHFRP42898 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MTHFRP42898 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
MTHFRP42898 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MTHFRP42898 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MTHFRP42898 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MTHFRP42898 C2orf69P4-201ENST00000565394 541 ntBASIC21.56■■□□□ 1.04
MTHFRP42898 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MTHFRP42898 AC124016.1-201ENST00000609552 612 ntBASIC21.56■■□□□ 1.04
MTHFRP42898 AL049637.2-201ENST00000641778 930 ntBASIC21.56■■□□□ 1.04
MTHFRP42898 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MTHFRP42898 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MTHFRP42898 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MTHFRP42898 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MTHFRP42898 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MTHFRP42898 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
MTHFRP42898 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.55■■□□□ 1.04
MTHFRP42898 AC233723.2-201ENST00000623798 2106 ntBASIC21.55■■□□□ 1.04
MTHFRP42898 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
MTHFRP42898 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.55■■□□□ 1.04
MTHFRP42898 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
MTHFRP42898 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.55■■□□□ 1.04
MTHFRP42898 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MTHFRP42898 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
MTHFRP42898 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.55■■□□□ 1.04
MTHFRP42898 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.55■■□□□ 1.04
MTHFRP42898 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MTHFRP42898 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.55■■□□□ 1.04
MTHFRP42898 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.55■■□□□ 1.04
MTHFRP42898 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MTHFRP42898 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MTHFRP42898 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MTHFRP42898 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.55■■□□□ 1.04
MTHFRP42898 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.55■■□□□ 1.04
MTHFRP42898 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
MTHFRP42898 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.55■■□□□ 1.04
MTHFRP42898 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
MTHFRP42898 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
MTHFRP42898 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MTHFRP42898 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
MTHFRP42898 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MTHFRP42898 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MTHFRP42898 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MTHFRP42898 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
MTHFRP42898 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MTHFRP42898 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.54■■□□□ 1.04
MTHFRP42898 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.54■■□□□ 1.04
MTHFRP42898 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MTHFRP42898 AC239809.2-201ENST00000415381 517 ntBASIC21.54■■□□□ 1.04
MTHFRP42898 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.54■■□□□ 1.04
MTHFRP42898 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.54■■□□□ 1.04
MTHFRP42898 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.54■■□□□ 1.04
MTHFRP42898 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.54■■□□□ 1.04
MTHFRP42898 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.54■■□□□ 1.04
MTHFRP42898 MIR4785-201ENST00000585005 73 ntBASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms