Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 JIP5YPR169W 1479 nt2.03□□□□□ -2.08
CDC40P40968 SEC26YDR238C 2922 nt2.03□□□□□ -2.08
CDC40P40968 SSF2YDR312W 1362 nt2.03□□□□□ -2.08
CDC40P40968 YJL086CYJL086C 369 nt2.03□□□□□ -2.08
CDC40P40968 YLR154W-AYLR154W-A 186 nt2.03□□□□□ -2.08
CDC40P40968 YPT6YLR262C 648 nt2.03□□□□□ -2.08
CDC40P40968 BRX1YOL077C 876 nt2.03□□□□□ -2.08
CDC40P40968 IPP1YBR011C 864 nt2.03□□□□□ -2.08
CDC40P40968 DAD3YBR233W-A 285 nt2.03□□□□□ -2.08
CDC40P40968 YOL098CYOL098C 3114 nt2.02□□□□□ -2.09
CDC40P40968 SSE1YPL106C 2082 nt2.02□□□□□ -2.09
CDC40P40968 DAD1YDR016C 285 nt2.02□□□□□ -2.09
CDC40P40968 GPI8YDR331W 1236 nt2.02□□□□□ -2.09
CDC40P40968 NCB2YDR397C 441 nt2.02□□□□□ -2.09
CDC40P40968 RSM18YER050C 417 nt2.02□□□□□ -2.09
CDC40P40968 HMF1YER057C 390 nt2.02□□□□□ -2.09
CDC40P40968 RIM9YMR063W 720 nt2.02□□□□□ -2.09
CDC40P40968 OST2YOR103C 393 nt2.02□□□□□ -2.09
CDC40P40968 SME1YOR159C 285 nt2.02□□□□□ -2.09
CDC40P40968 YPL034WYPL034W 498 nt2.02□□□□□ -2.09
CDC40P40968 YBR287WYBR287W 1284 nt2.02□□□□□ -2.09
CDC40P40968 VPH1YOR270C 2523 nt2.02□□□□□ -2.09
CDC40P40968 YJL181WYJL181W 1836 nt2.02□□□□□ -2.09
CDC40P40968 VAC8YEL013W 1737 nt2.02□□□□□ -2.09
CDC40P40968 MPH1YIR002C 2982 nt2.01□□□□□ -2.09
CDC40P40968 AYT1YLL063C 1425 nt2.01□□□□□ -2.09
CDC40P40968 SKP2YNL311C 2292 nt2.01□□□□□ -2.09
CDC40P40968 YDR261W-AYDR261W-A 1317 nt2.01□□□□□ -2.09
CDC40P40968 PBP4YDL053C 558 nt2.01□□□□□ -2.09
CDC40P40968 ERP6YGL002W 651 nt2.01□□□□□ -2.09
CDC40P40968 PEX4YGR133W 552 nt2.01□□□□□ -2.09
CDC40P40968 MBB1YJL199C 327 nt2.01□□□□□ -2.09
CDC40P40968 GPI14YJR013W 1212 nt2.01□□□□□ -2.09
CDC40P40968 ARL3YPL051W 597 nt2.01□□□□□ -2.09
CDC40P40968 NEW1YPL226W 3591 nt2.01□□□□□ -2.09
CDC40P40968 TAE2YPL009C 3117 nt2.01□□□□□ -2.09
CDC40P40968 DBP10YDL031W 2988 nt2.01□□□□□ -2.09
CDC40P40968 NCS2YNL119W 1482 nt2.01□□□□□ -2.09
CDC40P40968 VPS13YLL040C 9435 nt2□□□□□ -2.09
CDC40P40968 REV3YPL167C 4515 nt2□□□□□ -2.09
CDC40P40968 ASG1YIL130W 2895 nt2□□□□□ -2.09
CDC40P40968 FMP16YDR070C 282 nt2□□□□□ -2.09
CDC40P40968 TDA2YER071C 381 nt2□□□□□ -2.09
CDC40P40968 YGR109W-AYGR109W-A 873 nt2□□□□□ -2.09
CDC40P40968 YGR121W-AYGR121W-A 216 nt2□□□□□ -2.09
CDC40P40968 YIL082WYIL082W 873 nt2□□□□□ -2.09
CDC40P40968 BMT5YIL096C 1011 nt2□□□□□ -2.09
CDC40P40968 SDL1YIL167W 633 nt2□□□□□ -2.09
CDC40P40968 SHE2YKL130C 741 nt2□□□□□ -2.09
CDC40P40968 YLR307C-AYLR307C-A 264 nt2□□□□□ -2.09
CDC40P40968 COX14YML129C 213 nt2□□□□□ -2.09
CDC40P40968 ARF3YOR094W 552 nt2□□□□□ -2.09
CDC40P40968 MED8YBR193C 672 nt2□□□□□ -2.09
CDC40P40968 RPN3YER021W 1572 nt2□□□□□ -2.09
CDC40P40968 CHC1YGL206C 4962 nt2□□□□□ -2.09
CDC40P40968 UBP11YKR098C 2154 nt2□□□□□ -2.09
CDC40P40968 ECM25YJL201W 1800 nt2□□□□□ -2.09
CDC40P40968 YKL075CYKL075C 1353 nt1.99□□□□□ -2.09
CDC40P40968 TOR2YKL203C 7425 nt1.99□□□□□ -2.09
CDC40P40968 ELG1YOR144C 2376 nt1.99□□□□□ -2.09
CDC40P40968 snR78snR78 87 nt1.99□□□□□ -2.09
CDC40P40968 YDR248CYDR248C 582 nt1.99□□□□□ -2.09
CDC40P40968 VPS74YDR372C 1038 nt1.99□□□□□ -2.09
CDC40P40968 YIP1YGR172C 747 nt1.99□□□□□ -2.09
CDC40P40968 YKL033W-AYKL033W-A 711 nt1.99□□□□□ -2.09
CDC40P40968 RPC25YKL144C 639 nt1.99□□□□□ -2.09
CDC40P40968 YOR055WYOR055W 435 nt1.99□□□□□ -2.09
CDC40P40968 PRK1YIL095W 2433 nt1.99□□□□□ -2.09
CDC40P40968 SAP185YJL098W 3177 nt1.98□□□□□ -2.09
CDC40P40968 RPO41YFL036W 4056 nt1.98□□□□□ -2.09
CDC40P40968 YFR056CYFR056C 369 nt1.98□□□□□ -2.09
CDC40P40968 PGD1YGL025C 1194 nt1.98□□□□□ -2.09
CDC40P40968 TAD1YGL243W 1203 nt1.98□□□□□ -2.09
CDC40P40968 POP7YBR167C 423 nt1.98□□□□□ -2.09
CDC40P40968 TRL1YJL087C 2484 nt1.98□□□□□ -2.09
CDC40P40968 VPS8YAL002W 3825 nt1.98□□□□□ -2.09
CDC40P40968 COS111YBR203W 2775 nt1.98□□□□□ -2.09
CDC40P40968 NIC96YFR002W 2520 nt1.97□□□□□ -2.09
CDC40P40968 YDR115WYDR115W 318 nt1.97□□□□□ -2.09
CDC40P40968 RPL27BYDR471W 411 nt1.97□□□□□ -2.09
CDC40P40968 YGL109WYGL109W 324 nt1.97□□□□□ -2.09
CDC40P40968 YJL047C-AYJL047C-A 135 nt1.97□□□□□ -2.09
CDC40P40968 YLR224WYLR224W 1110 nt1.97□□□□□ -2.09
CDC40P40968 YML037CYML037C 1023 nt1.97□□□□□ -2.09
CDC40P40968 YOR283WYOR283W 693 nt1.97□□□□□ -2.09
CDC40P40968 VMA9YCL005W-A 222 nt1.97□□□□□ -2.09
CDC40P40968 IRC8YJL051W 2469 nt1.97□□□□□ -2.09
CDC40P40968 HAA1YPR008W 2085 nt1.97□□□□□ -2.09
CDC40P40968 PTC5YOR090C 1719 nt1.97□□□□□ -2.09
CDC40P40968 STD1YOR047C 1335 nt1.96□□□□□ -2.1
CDC40P40968 UBR2YLR024C 5619 nt1.96□□□□□ -2.1
CDC40P40968 snR70snR70 164 nt1.96□□□□□ -2.1
CDC40P40968 YGR226CYGR226C 210 nt1.96□□□□□ -2.1
CDC40P40968 YLR302CYLR302C 363 nt1.96□□□□□ -2.1
CDC40P40968 HHT2YNL031C 411 nt1.96□□□□□ -2.1
CDC40P40968 YNL179CYNL179C 438 nt1.96□□□□□ -2.1
CDC40P40968 YOR331CYOR331C 558 nt1.96□□□□□ -2.1
CDC40P40968 RTT101YJL047C 2529 nt1.96□□□□□ -2.1
CDC40P40968 REV1YOR346W 2958 nt1.96□□□□□ -2.1
CDC40P40968 VPS64YDR200C 1815 nt1.96□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 34.3 ms