Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HADHAP40939 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HADHAP40939 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
HADHAP40939 KRT18P11-201ENST00000435214 1283 ntBASIC20.78■□□□□ 0.92
HADHAP40939 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.78■□□□□ 0.92
HADHAP40939 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.78■□□□□ 0.92
HADHAP40939 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HADHAP40939 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HADHAP40939 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.78■□□□□ 0.92
HADHAP40939 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HADHAP40939 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
HADHAP40939 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HADHAP40939 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HADHAP40939 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HADHAP40939 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
HADHAP40939 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HADHAP40939 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.77■□□□□ 0.92
HADHAP40939 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.77■□□□□ 0.92
HADHAP40939 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HADHAP40939 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HADHAP40939 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HADHAP40939 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HADHAP40939 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HADHAP40939 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.77■□□□□ 0.92
HADHAP40939 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HADHAP40939 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.77■□□□□ 0.92
HADHAP40939 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.77■□□□□ 0.92
HADHAP40939 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.77■□□□□ 0.92
HADHAP40939 UBE2DNL-204ENST00000602536 740 ntBASIC20.77■□□□□ 0.92
HADHAP40939 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HADHAP40939 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HADHAP40939 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HADHAP40939 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.77■□□□□ 0.92
HADHAP40939 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.77■□□□□ 0.91
HADHAP40939 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
HADHAP40939 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
HADHAP40939 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
HADHAP40939 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.76■□□□□ 0.91
HADHAP40939 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HADHAP40939 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.76■□□□□ 0.91
HADHAP40939 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.76■□□□□ 0.91
HADHAP40939 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.76■□□□□ 0.91
HADHAP40939 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HADHAP40939 AC137761.2-201ENST00000561729 223 ntBASIC20.76■□□□□ 0.91
HADHAP40939 AC145350.3-201ENST00000569033 163 ntBASIC20.76■□□□□ 0.91
HADHAP40939 RARRES2P11-201ENST00000635158 484 ntBASIC20.76■□□□□ 0.91
HADHAP40939 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HADHAP40939 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
HADHAP40939 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
HADHAP40939 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HADHAP40939 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HADHAP40939 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HADHAP40939 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.76■□□□□ 0.91
HADHAP40939 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.75■□□□□ 0.91
HADHAP40939 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.75■□□□□ 0.91
HADHAP40939 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HADHAP40939 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HADHAP40939 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HADHAP40939 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HADHAP40939 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HADHAP40939 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HADHAP40939 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HADHAP40939 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HADHAP40939 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HADHAP40939 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HADHAP40939 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.75■□□□□ 0.91
HADHAP40939 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
HADHAP40939 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.75■□□□□ 0.91
HADHAP40939 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.75■□□□□ 0.91
HADHAP40939 AC243732.1-201ENST00000612648 864 ntBASIC20.75■□□□□ 0.91
HADHAP40939 MYCNOS-205ENST00000641950 531 ntBASIC20.75■□□□□ 0.91
HADHAP40939 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
HADHAP40939 AP005212.1-201ENST00000581547 1997 ntBASIC20.75■□□□□ 0.91
HADHAP40939 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HADHAP40939 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.75■□□□□ 0.91
HADHAP40939 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
HADHAP40939 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HADHAP40939 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HADHAP40939 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HADHAP40939 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HADHAP40939 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HADHAP40939 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HADHAP40939 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
HADHAP40939 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HADHAP40939 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
HADHAP40939 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HADHAP40939 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.74■□□□□ 0.91
HADHAP40939 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.74■□□□□ 0.91
HADHAP40939 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.74■□□□□ 0.91
HADHAP40939 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.74■□□□□ 0.91
HADHAP40939 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HADHAP40939 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HADHAP40939 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HADHAP40939 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
HADHAP40939 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.73■□□□□ 0.91
HADHAP40939 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.73■□□□□ 0.91
HADHAP40939 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.73■□□□□ 0.91
HADHAP40939 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HADHAP40939 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HADHAP40939 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms