Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.97■□□□□ 0.63
ABCD3P28288 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ABCD3P28288 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ABCD3P28288 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ABCD3P28288 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.96■□□□□ 0.63
ABCD3P28288 SLC25A24-204ENST00000569674 2357 ntBASIC18.96■□□□□ 0.63
ABCD3P28288 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
ABCD3P28288 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ABCD3P28288 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ABCD3P28288 GPX1P1-201ENST00000388829 606 ntBASIC18.96■□□□□ 0.63
ABCD3P28288 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
ABCD3P28288 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ABCD3P28288 AL512625.2-201ENST00000417533 625 ntBASIC18.96■□□□□ 0.63
ABCD3P28288 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.96■□□□□ 0.63
ABCD3P28288 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ABCD3P28288 AC093787.1-201ENST00000450396 207 ntBASIC18.96■□□□□ 0.63
ABCD3P28288 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ABCD3P28288 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.96■□□□□ 0.63
ABCD3P28288 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ABCD3P28288 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
ABCD3P28288 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.96■□□□□ 0.63
ABCD3P28288 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
ABCD3P28288 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ABCD3P28288 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ABCD3P28288 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ABCD3P28288 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ABCD3P28288 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ABCD3P28288 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.95■□□□□ 0.62
ABCD3P28288 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ABCD3P28288 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.95■□□□□ 0.62
ABCD3P28288 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.95■□□□□ 0.62
ABCD3P28288 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.95■□□□□ 0.62
ABCD3P28288 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.95■□□□□ 0.62
ABCD3P28288 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.95■□□□□ 0.62
ABCD3P28288 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.95■□□□□ 0.62
ABCD3P28288 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ABCD3P28288 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.95■□□□□ 0.62
ABCD3P28288 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCD3P28288 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCD3P28288 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ABCD3P28288 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCD3P28288 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ABCD3P28288 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCD3P28288 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ABCD3P28288 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
ABCD3P28288 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.94■□□□□ 0.62
ABCD3P28288 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCD3P28288 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCD3P28288 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.94■□□□□ 0.62
ABCD3P28288 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCD3P28288 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.94■□□□□ 0.62
ABCD3P28288 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ABCD3P28288 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCD3P28288 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCD3P28288 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCD3P28288 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCD3P28288 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ABCD3P28288 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCD3P28288 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
ABCD3P28288 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCD3P28288 AC010980.2-201ENST00000587099 1412 ntBASIC18.93■□□□□ 0.62
ABCD3P28288 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCD3P28288 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.93■□□□□ 0.62
ABCD3P28288 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.93■□□□□ 0.62
ABCD3P28288 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCD3P28288 AC100791.3-201ENST00000617619 330 ntBASIC18.93■□□□□ 0.62
ABCD3P28288 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
ABCD3P28288 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ABCD3P28288 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.93■□□□□ 0.62
ABCD3P28288 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCD3P28288 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCD3P28288 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCD3P28288 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCD3P28288 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ABCD3P28288 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ABCD3P28288 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCD3P28288 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCD3P28288 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCD3P28288 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCD3P28288 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.92■□□□□ 0.62
ABCD3P28288 MKRN4P-201ENST00000444706 1521 ntBASIC18.92■□□□□ 0.62
ABCD3P28288 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCD3P28288 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ABCD3P28288 ID1-201ENST00000376105 1233 ntBASIC18.92■□□□□ 0.62
ABCD3P28288 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.92■□□□□ 0.62
ABCD3P28288 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCD3P28288 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCD3P28288 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCD3P28288 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
ABCD3P28288 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCD3P28288 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.91■□□□□ 0.62
ABCD3P28288 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCD3P28288 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.91■□□□□ 0.62
ABCD3P28288 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCD3P28288 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.91■□□□□ 0.62
ABCD3P28288 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
ABCD3P28288 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCD3P28288 MCRIP2P1-201ENST00000394346 511 ntBASIC18.91■□□□□ 0.62
ABCD3P28288 HLA-L-209ENST00000420110 1011 ntBASIC18.91■□□□□ 0.62
ABCD3P28288 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms