Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC008175.2-201ENST00000612840 297 ntBASIC20.16■□□□□ 0.82
VARSP26640 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.16■□□□□ 0.82
VARSP26640 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
VARSP26640 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
VARSP26640 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.16■□□□□ 0.82
VARSP26640 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.16■□□□□ 0.82
VARSP26640 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
VARSP26640 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VARSP26640 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VARSP26640 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VARSP26640 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VARSP26640 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.15■□□□□ 0.82
VARSP26640 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
VARSP26640 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VARSP26640 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.15■□□□□ 0.82
VARSP26640 AC010141.2-201ENST00000452426 721 ntBASIC20.15■□□□□ 0.82
VARSP26640 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.15■□□□□ 0.82
VARSP26640 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.15■□□□□ 0.82
VARSP26640 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VARSP26640 AP001160.3-201ENST00000601484 763 ntBASIC20.15■□□□□ 0.82
VARSP26640 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VARSP26640 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
VARSP26640 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.15■□□□□ 0.82
VARSP26640 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VARSP26640 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
VARSP26640 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
VARSP26640 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.14■□□□□ 0.81
VARSP26640 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VARSP26640 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VARSP26640 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
VARSP26640 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.14■□□□□ 0.81
VARSP26640 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.14■□□□□ 0.81
VARSP26640 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.14■□□□□ 0.81
VARSP26640 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.14■□□□□ 0.81
VARSP26640 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.14■□□□□ 0.81
VARSP26640 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.14■□□□□ 0.81
VARSP26640 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.14■□□□□ 0.81
VARSP26640 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VARSP26640 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VARSP26640 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VARSP26640 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
VARSP26640 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VARSP26640 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.13■□□□□ 0.81
VARSP26640 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VARSP26640 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
VARSP26640 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VARSP26640 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VARSP26640 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.13■□□□□ 0.81
VARSP26640 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VARSP26640 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VARSP26640 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.13■□□□□ 0.81
VARSP26640 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VARSP26640 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.13■□□□□ 0.81
VARSP26640 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
VARSP26640 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.13■□□□□ 0.81
VARSP26640 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.13■□□□□ 0.81
VARSP26640 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
VARSP26640 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
VARSP26640 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VARSP26640 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VARSP26640 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VARSP26640 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
VARSP26640 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VARSP26640 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
VARSP26640 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VARSP26640 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARSP26640 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARSP26640 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
VARSP26640 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARSP26640 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARSP26640 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VARSP26640 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARSP26640 POU5F1P4-201ENST00000413175 1085 ntBASIC20.12■□□□□ 0.81
VARSP26640 AC026185.1-201ENST00000445748 174 ntBASIC20.12■□□□□ 0.81
VARSP26640 SLC7A5P2-201ENST00000553010 536 ntBASIC20.12■□□□□ 0.81
VARSP26640 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VARSP26640 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARSP26640 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARSP26640 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARSP26640 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
VARSP26640 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VARSP26640 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VARSP26640 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VARSP26640 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.11■□□□□ 0.81
VARSP26640 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
VARSP26640 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VARSP26640 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
VARSP26640 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.11■□□□□ 0.81
VARSP26640 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.11■□□□□ 0.81
VARSP26640 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VARSP26640 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.11■□□□□ 0.81
VARSP26640 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VARSP26640 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.11■□□□□ 0.81
VARSP26640 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VARSP26640 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.1■□□□□ 0.81
VARSP26640 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.1■□□□□ 0.81
VARSP26640 KRT18P11-201ENST00000435214 1283 ntBASIC20.1■□□□□ 0.81
VARSP26640 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VARSP26640 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.1■□□□□ 0.81
VARSP26640 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms