Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.4■□□□□ 0.38
COL8A2P25067 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.4■□□□□ 0.38
COL8A2P25067 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
COL8A2P25067 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL8A2P25067 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL8A2P25067 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL8A2P25067 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL8A2P25067 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL8A2P25067 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL8A2P25067 AC116050.2-201ENST00000612102 1779 ntBASIC17.4■□□□□ 0.38
COL8A2P25067 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL8A2P25067 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.4■□□□□ 0.38
COL8A2P25067 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL8A2P25067 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL8A2P25067 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
COL8A2P25067 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COL8A2P25067 AC244015.2-201ENST00000616358 1861 ntBASIC17.39■□□□□ 0.38
COL8A2P25067 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.39■□□□□ 0.38
COL8A2P25067 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COL8A2P25067 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL8A2P25067 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.39■□□□□ 0.37
COL8A2P25067 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.39■□□□□ 0.37
COL8A2P25067 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.39■□□□□ 0.37
COL8A2P25067 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
COL8A2P25067 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL8A2P25067 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
COL8A2P25067 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.39■□□□□ 0.37
COL8A2P25067 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL8A2P25067 AC083880.1-201ENST00000608266 535 ntBASIC17.39■□□□□ 0.37
COL8A2P25067 MYC-209ENST00000641252 345 ntBASIC17.39■□□□□ 0.37
COL8A2P25067 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL8A2P25067 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL8A2P25067 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL8A2P25067 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
COL8A2P25067 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL8A2P25067 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL8A2P25067 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL8A2P25067 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL8A2P25067 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL8A2P25067 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
COL8A2P25067 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL8A2P25067 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL8A2P25067 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL8A2P25067 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL8A2P25067 MCRIP2P1-201ENST00000394346 511 ntBASIC17.38■□□□□ 0.37
COL8A2P25067 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
COL8A2P25067 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.38■□□□□ 0.37
COL8A2P25067 TMEM191A-211ENST00000637163 1067 ntBASIC17.38■□□□□ 0.37
COL8A2P25067 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.38■□□□□ 0.37
COL8A2P25067 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL8A2P25067 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL8A2P25067 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
COL8A2P25067 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.38■□□□□ 0.37
COL8A2P25067 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL8A2P25067 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.37■□□□□ 0.37
COL8A2P25067 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.37■□□□□ 0.37
COL8A2P25067 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
COL8A2P25067 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL8A2P25067 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL8A2P25067 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COL8A2P25067 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.37■□□□□ 0.37
COL8A2P25067 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL8A2P25067 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL8A2P25067 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL8A2P25067 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.37■□□□□ 0.37
COL8A2P25067 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL8A2P25067 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.37■□□□□ 0.37
COL8A2P25067 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COL8A2P25067 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL8A2P25067 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL8A2P25067 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL8A2P25067 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL8A2P25067 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL8A2P25067 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.37■□□□□ 0.37
COL8A2P25067 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL8A2P25067 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.37■□□□□ 0.37
COL8A2P25067 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL8A2P25067 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.36■□□□□ 0.37
COL8A2P25067 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
COL8A2P25067 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL8A2P25067 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL8A2P25067 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL8A2P25067 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL8A2P25067 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL8A2P25067 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL8A2P25067 KRT18P68-201ENST00000392293 1000 ntBASIC17.36■□□□□ 0.37
COL8A2P25067 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
COL8A2P25067 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.36■□□□□ 0.37
COL8A2P25067 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL8A2P25067 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.36■□□□□ 0.37
COL8A2P25067 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL8A2P25067 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL8A2P25067 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL8A2P25067 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL8A2P25067 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.35■□□□□ 0.37
COL8A2P25067 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL8A2P25067 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL8A2P25067 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.35■□□□□ 0.37
COL8A2P25067 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL8A2P25067 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms