Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.73■□□□□ 0.43
CCL1P22362 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL1P22362 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL1P22362 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.73■□□□□ 0.43
CCL1P22362 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.73■□□□□ 0.43
CCL1P22362 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCL1P22362 SLC7A5P1-201ENST00000568957 537 ntBASIC17.73■□□□□ 0.43
CCL1P22362 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL1P22362 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.73■□□□□ 0.43
CCL1P22362 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL1P22362 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL1P22362 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL1P22362 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL1P22362 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL1P22362 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL1P22362 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCL1P22362 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL1P22362 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL1P22362 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL1P22362 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL1P22362 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL1P22362 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.72■□□□□ 0.43
CCL1P22362 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL1P22362 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL1P22362 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCL1P22362 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CCL1P22362 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL1P22362 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.71■□□□□ 0.43
CCL1P22362 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.71■□□□□ 0.43
CCL1P22362 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL1P22362 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.71■□□□□ 0.43
CCL1P22362 AC099778.1-201ENST00000568593 1911 ntBASIC17.71■□□□□ 0.43
CCL1P22362 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCL1P22362 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.71■□□□□ 0.43
CCL1P22362 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CCL1P22362 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCL1P22362 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.71■□□□□ 0.43
CCL1P22362 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.71■□□□□ 0.43
CCL1P22362 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.71■□□□□ 0.43
CCL1P22362 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.71■□□□□ 0.43
CCL1P22362 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.71■□□□□ 0.43
CCL1P22362 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.71■□□□□ 0.43
CCL1P22362 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CCL1P22362 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.71■□□□□ 0.43
CCL1P22362 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL1P22362 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.71■□□□□ 0.43
CCL1P22362 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL1P22362 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCL1P22362 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.7■□□□□ 0.42
CCL1P22362 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL1P22362 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL1P22362 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.7■□□□□ 0.42
CCL1P22362 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL1P22362 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL1P22362 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL1P22362 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCL1P22362 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCL1P22362 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCL1P22362 AC091799.1-201ENST00000422823 811 ntBASIC17.7■□□□□ 0.42
CCL1P22362 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL1P22362 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL1P22362 KRT18P14-201ENST00000534205 1250 ntBASIC17.7■□□□□ 0.42
CCL1P22362 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.7■□□□□ 0.42
CCL1P22362 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.7■□□□□ 0.42
CCL1P22362 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.7■□□□□ 0.42
CCL1P22362 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.7■□□□□ 0.42
CCL1P22362 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.7■□□□□ 0.42
CCL1P22362 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL1P22362 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCL1P22362 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCL1P22362 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.7■□□□□ 0.42
CCL1P22362 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCL1P22362 RBM17P2-201ENST00000616397 1405 ntBASIC17.7■□□□□ 0.42
CCL1P22362 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCL1P22362 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL1P22362 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL1P22362 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL1P22362 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCL1P22362 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL1P22362 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL1P22362 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL1P22362 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.69■□□□□ 0.42
CCL1P22362 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCL1P22362 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL1P22362 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCL1P22362 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL1P22362 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.69■□□□□ 0.42
CCL1P22362 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CCL1P22362 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CCL1P22362 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.69■□□□□ 0.42
CCL1P22362 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.69■□□□□ 0.42
CCL1P22362 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCL1P22362 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.69■□□□□ 0.42
CCL1P22362 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.69■□□□□ 0.42
CCL1P22362 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.69■□□□□ 0.42
CCL1P22362 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.69■□□□□ 0.42
CCL1P22362 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.69■□□□□ 0.42
CCL1P22362 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCL1P22362 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.69■□□□□ 0.42
CCL1P22362 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms