Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH3P22223 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.09■□□□□ 0.81
CDH3P22223 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH3P22223 AL355802.2-201ENST00000402069 882 ntBASIC20.09■□□□□ 0.81
CDH3P22223 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH3P22223 CYP2T1P-201ENST00000432607 1285 ntBASIC20.09■□□□□ 0.81
CDH3P22223 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CDH3P22223 AF201337.1-201ENST00000520239 748 ntBASIC20.09■□□□□ 0.81
CDH3P22223 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH3P22223 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.09■□□□□ 0.81
CDH3P22223 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.09■□□□□ 0.81
CDH3P22223 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
CDH3P22223 AC008694.1-202ENST00000636953 945 ntBASIC20.09■□□□□ 0.81
CDH3P22223 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH3P22223 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH3P22223 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH3P22223 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH3P22223 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.08■□□□□ 0.81
CDH3P22223 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
CDH3P22223 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.08■□□□□ 0.81
CDH3P22223 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH3P22223 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH3P22223 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CDH3P22223 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH3P22223 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.08■□□□□ 0.81
CDH3P22223 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.08■□□□□ 0.81
CDH3P22223 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
CDH3P22223 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.08■□□□□ 0.81
CDH3P22223 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.08■□□□□ 0.81
CDH3P22223 AC105036.2-201ENST00000569468 176 ntBASIC20.08■□□□□ 0.81
CDH3P22223 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CDH3P22223 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH3P22223 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
CDH3P22223 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.08■□□□□ 0.8
CDH3P22223 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.08■□□□□ 0.8
CDH3P22223 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CDH3P22223 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH3P22223 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH3P22223 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH3P22223 SLC29A4P1-201ENST00000398760 971 ntBASIC20.07■□□□□ 0.8
CDH3P22223 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.07■□□□□ 0.8
CDH3P22223 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.07■□□□□ 0.8
CDH3P22223 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH3P22223 AC069236.1-201ENST00000604339 616 ntBASIC20.07■□□□□ 0.8
CDH3P22223 AL591742.1-201ENST00000604433 565 ntBASIC20.07■□□□□ 0.8
CDH3P22223 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH3P22223 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH3P22223 AC007952.6-201ENST00000573168 2673 ntBASIC20.07■□□□□ 0.8
CDH3P22223 AC003957.1-201ENST00000625108 2673 ntBASIC20.07■□□□□ 0.8
CDH3P22223 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CDH3P22223 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH3P22223 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.06■□□□□ 0.8
CDH3P22223 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH3P22223 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CDH3P22223 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH3P22223 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH3P22223 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH3P22223 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.06■□□□□ 0.8
CDH3P22223 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH3P22223 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.06■□□□□ 0.8
CDH3P22223 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH3P22223 AC133552.2-202ENST00000575694 574 ntBASIC20.06■□□□□ 0.8
CDH3P22223 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.06■□□□□ 0.8
CDH3P22223 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.06■□□□□ 0.8
CDH3P22223 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH3P22223 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDH3P22223 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH3P22223 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDH3P22223 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH3P22223 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH3P22223 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH3P22223 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH3P22223 TSPY6P-201ENST00000448518 926 ntBASIC20.05■□□□□ 0.8
CDH3P22223 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.05■□□□□ 0.8
CDH3P22223 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH3P22223 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH3P22223 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH3P22223 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH3P22223 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.05■□□□□ 0.8
CDH3P22223 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH3P22223 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH3P22223 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CDH3P22223 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH3P22223 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
CDH3P22223 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
CDH3P22223 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH3P22223 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH3P22223 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.04■□□□□ 0.8
CDH3P22223 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CDH3P22223 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH3P22223 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH3P22223 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH3P22223 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.04■□□□□ 0.8
CDH3P22223 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CDH3P22223 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH3P22223 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CDH3P22223 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH3P22223 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH3P22223 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH3P22223 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms