Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 SMT3YDR510W 306 nt3.01□□□□□ -1.93
CDC43P18898 HYR1YIR037W 492 nt3.01□□□□□ -1.93
CDC43P18898 YKL111CYKL111C 336 nt3.01□□□□□ -1.93
CDC43P18898 RPL37AYLR185W 267 nt3.01□□□□□ -1.93
CDC43P18898 snR51snR51 107 nt3.01□□□□□ -1.93
CDC43P18898 APL4YPR029C 2499 nt3□□□□□ -1.93
CDC43P18898 SEC6YIL068C 2418 nt3□□□□□ -1.93
CDC43P18898 YDR406W-AYDR406W-A 246 nt3□□□□□ -1.93
CDC43P18898 PFD1YJL179W 330 nt3□□□□□ -1.93
CDC43P18898 TIM8YJR135W-A 264 nt3□□□□□ -1.93
CDC43P18898 TMA10YLR327C 261 nt3□□□□□ -1.93
CDC43P18898 YOL160WYOL160W 342 nt3□□□□□ -1.93
CDC43P18898 YOR050CYOR050C 348 nt3□□□□□ -1.93
CDC43P18898 ACE2YLR131C 2313 nt3□□□□□ -1.93
CDC43P18898 PAC1YOR269W 1485 nt3□□□□□ -1.93
CDC43P18898 HBT1YDL223C 3141 nt3□□□□□ -1.93
CDC43P18898 RKM1YPL208W 1752 nt3□□□□□ -1.93
CDC43P18898 EMC1YCL045C 2283 nt2.99□□□□□ -1.93
CDC43P18898 YCR075W-AYCR075W-A 228 nt2.99□□□□□ -1.93
CDC43P18898 ALG13YGL047W 609 nt2.99□□□□□ -1.93
CDC43P18898 RPB9YGL070C 369 nt2.99□□□□□ -1.93
CDC43P18898 SPT4YGR063C 309 nt2.99□□□□□ -1.93
CDC43P18898 YHR214C-EYHR214C-E 300 nt2.99□□□□□ -1.93
CDC43P18898 YJL197C-AYJL197C-A 282 nt2.99□□□□□ -1.93
CDC43P18898 SOD1YJR104C 465 nt2.99□□□□□ -1.93
CDC43P18898 YAR070CYAR070C 300 nt2.99□□□□□ -1.93
CDC43P18898 SLP1YOR154W 1764 nt2.99□□□□□ -1.93
CDC43P18898 ERB1YMR049C 2424 nt2.99□□□□□ -1.93
CDC43P18898 YSW1YBR148W 1830 nt2.98□□□□□ -1.93
CDC43P18898 OSH3YHR073W 2991 nt2.98□□□□□ -1.93
CDC43P18898 COX1Q0045 1605 nt2.98□□□□□ -1.93
CDC43P18898 GSC2YGR032W 5688 nt2.98□□□□□ -1.93
CDC43P18898 YGL041CYGL041C 204 nt2.98□□□□□ -1.93
CDC43P18898 tT(UGU)Q1tT(UGU)Q1 76 nt2.98□□□□□ -1.93
CDC43P18898 APQ12YIL040W 417 nt2.98□□□□□ -1.93
CDC43P18898 PAM16YJL104W 450 nt2.98□□□□□ -1.93
CDC43P18898 RDN5-1RDN5-1 121 nt2.98□□□□□ -1.93
CDC43P18898 RDN5-6RDN5-6 121 nt2.98□□□□□ -1.93
CDC43P18898 RSM19YNR037C 276 nt2.98□□□□□ -1.93
CDC43P18898 YPR077CYPR077C 372 nt2.98□□□□□ -1.93
CDC43P18898 MUS81YDR386W 1899 nt2.98□□□□□ -1.93
CDC43P18898 VHR2YER064C 1518 nt2.98□□□□□ -1.93
CDC43P18898 AIP1YMR092C 1848 nt2.98□□□□□ -1.93
CDC43P18898 FLO8YER109C 2400 nt2.98□□□□□ -1.93
CDC43P18898 TRZ1YKR079C 2517 nt2.97□□□□□ -1.93
CDC43P18898 YGR237CYGR237C 2358 nt2.97□□□□□ -1.93
CDC43P18898 SEA4YBL104C 3117 nt2.97□□□□□ -1.93
CDC43P18898 YBL008W-AYBL008W-A 240 nt2.97□□□□□ -1.93
CDC43P18898 OSW7YFR039C 1533 nt2.97□□□□□ -1.93
CDC43P18898 KAP95YLR347C 2586 nt2.97□□□□□ -1.93
CDC43P18898 MCD1YDL003W 1701 nt2.96□□□□□ -1.93
CDC43P18898 NUP85YJR042W 2235 nt2.96□□□□□ -1.94
CDC43P18898 RPL35AYDL191W 363 nt2.96□□□□□ -1.94
CDC43P18898 YEL020C-BYEL020C-B 198 nt2.96□□□□□ -1.94
CDC43P18898 AIM11YER093C-A 414 nt2.96□□□□□ -1.94
CDC43P18898 TMA22YJR014W 597 nt2.96□□□□□ -1.94
CDC43P18898 YPR014CYPR014C 330 nt2.96□□□□□ -1.94
CDC43P18898 YCL023CYCL023C 348 nt2.96□□□□□ -1.94
CDC43P18898 PCF11YDR228C 1881 nt2.96□□□□□ -1.94
CDC43P18898 YDR133CYDR133C 336 nt2.95□□□□□ -1.94
CDC43P18898 CSN9YDR179C 489 nt2.95□□□□□ -1.94
CDC43P18898 ATP8Q0080 147 nt2.95□□□□□ -1.94
CDC43P18898 YIL066W-AYIL066W-A 444 nt2.95□□□□□ -1.94
CDC43P18898 NCE101YJL205C 162 nt2.95□□□□□ -1.94
CDC43P18898 TAR1YLR154W-C 375 nt2.95□□□□□ -1.94
CDC43P18898 LDS2YOL047C 1071 nt2.95□□□□□ -1.94
CDC43P18898 HHF1YBR009C 312 nt2.95□□□□□ -1.94
CDC43P18898 ISU1YPL135W 498 nt2.95□□□□□ -1.94
CDC43P18898 ATP15YPL271W 189 nt2.95□□□□□ -1.94
CDC43P18898 CWH41YGL027C 2502 nt2.95□□□□□ -1.94
CDC43P18898 YLR001CYLR001C 2589 nt2.95□□□□□ -1.94
CDC43P18898 MTR4YJL050W 3222 nt2.95□□□□□ -1.94
CDC43P18898 JJJ2YJL162C 1752 nt2.95□□□□□ -1.94
CDC43P18898 TLC1TLC1 1301 nt2.94□□□□□ -1.94
CDC43P18898 MPS1YDL028C 2295 nt2.94□□□□□ -1.94
CDC43P18898 SPT16YGL207W 3108 nt2.94□□□□□ -1.94
CDC43P18898 PDR12YPL058C 4536 nt2.94□□□□□ -1.94
CDC43P18898 YDL062WYDL062W 426 nt2.94□□□□□ -1.94
CDC43P18898 TSA2YDR453C 591 nt2.94□□□□□ -1.94
CDC43P18898 YGL074CYGL074C 327 nt2.94□□□□□ -1.94
CDC43P18898 YJL182CYJL182C 318 nt2.94□□□□□ -1.94
CDC43P18898 HEM4YOR278W 828 nt2.94□□□□□ -1.94
CDC43P18898 SQS1YNL224C 2304 nt2.94□□□□□ -1.94
CDC43P18898 STN1YDR082W 1485 nt2.94□□□□□ -1.94
CDC43P18898 RAD26YJR035W 3258 nt2.94□□□□□ -1.94
CDC43P18898 KIN4YOR233W 2403 nt2.93□□□□□ -1.94
CDC43P18898 CIN1YOR349W 3045 nt2.93□□□□□ -1.94
CDC43P18898 TIF35YDR429C 825 nt2.93□□□□□ -1.94
CDC43P18898 RPL14BYHL001W 417 nt2.93□□□□□ -1.94
CDC43P18898 ABF2YMR072W 552 nt2.93□□□□□ -1.94
CDC43P18898 FEX2YPL279C 1128 nt2.93□□□□□ -1.94
CDC43P18898 snR42snR42 351 nt2.93□□□□□ -1.94
CDC43P18898 KEL2YGR238C 2649 nt2.93□□□□□ -1.94
CDC43P18898 SYT1YPR095C 3681 nt2.93□□□□□ -1.94
CDC43P18898 CHL1YPL008W 2586 nt2.93□□□□□ -1.94
CDC43P18898 ARP7YPR034W 1434 nt2.93□□□□□ -1.94
CDC43P18898 FAA2YER015W 2235 nt2.92□□□□□ -1.94
CDC43P18898 TPS2YDR074W 2691 nt2.92□□□□□ -1.94
CDC43P18898 NSP1YJL041W 2472 nt2.92□□□□□ -1.94
CDC43P18898 RED1YLR263W 2484 nt2.92□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 44.5 ms