Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.24■□□□□ 0.83
NELFEP18615 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NELFEP18615 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NELFEP18615 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.24■□□□□ 0.83
NELFEP18615 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
NELFEP18615 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NELFEP18615 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NELFEP18615 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
NELFEP18615 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NELFEP18615 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NELFEP18615 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
NELFEP18615 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NELFEP18615 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NELFEP18615 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NELFEP18615 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
NELFEP18615 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NELFEP18615 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NELFEP18615 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NELFEP18615 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NELFEP18615 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.23■□□□□ 0.83
NELFEP18615 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NELFEP18615 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NELFEP18615 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NELFEP18615 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NELFEP18615 TERF1P5-201ENST00000477545 1207 ntBASIC20.23■□□□□ 0.83
NELFEP18615 AC083906.2-201ENST00000511578 360 ntBASIC20.23■□□□□ 0.83
NELFEP18615 AC013268.1-206ENST00000638368 961 ntBASIC20.23■□□□□ 0.83
NELFEP18615 AC112229.1-201ENST00000639295 961 ntBASIC20.23■□□□□ 0.83
NELFEP18615 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NELFEP18615 AC003102.1-202ENST00000563394 1796 ntBASIC20.23■□□□□ 0.83
NELFEP18615 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
NELFEP18615 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NELFEP18615 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.23■□□□□ 0.83
NELFEP18615 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.22■□□□□ 0.83
NELFEP18615 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NELFEP18615 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.22■□□□□ 0.83
NELFEP18615 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
NELFEP18615 AL355802.2-201ENST00000402069 882 ntBASIC20.22■□□□□ 0.83
NELFEP18615 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.22■□□□□ 0.83
NELFEP18615 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NELFEP18615 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NELFEP18615 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NELFEP18615 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NELFEP18615 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NELFEP18615 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.22■□□□□ 0.83
NELFEP18615 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NELFEP18615 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NELFEP18615 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.22■□□□□ 0.83
NELFEP18615 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.22■□□□□ 0.83
NELFEP18615 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.21■□□□□ 0.83
NELFEP18615 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NELFEP18615 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.21■□□□□ 0.83
NELFEP18615 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NELFEP18615 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NELFEP18615 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NELFEP18615 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NELFEP18615 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.21■□□□□ 0.83
NELFEP18615 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.21■□□□□ 0.83
NELFEP18615 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.21■□□□□ 0.83
NELFEP18615 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NELFEP18615 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NELFEP18615 AC244015.2-201ENST00000616358 1861 ntBASIC20.21■□□□□ 0.83
NELFEP18615 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NELFEP18615 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NELFEP18615 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
NELFEP18615 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NELFEP18615 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELFEP18615 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELFEP18615 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.2■□□□□ 0.82
NELFEP18615 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NELFEP18615 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.2■□□□□ 0.82
NELFEP18615 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NELFEP18615 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NELFEP18615 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.2■□□□□ 0.82
NELFEP18615 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.2■□□□□ 0.82
NELFEP18615 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.2■□□□□ 0.82
NELFEP18615 TSPY6P-201ENST00000448518 926 ntBASIC20.2■□□□□ 0.82
NELFEP18615 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELFEP18615 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NELFEP18615 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.2■□□□□ 0.82
NELFEP18615 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.2■□□□□ 0.82
NELFEP18615 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.2■□□□□ 0.82
NELFEP18615 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NELFEP18615 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELFEP18615 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NELFEP18615 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.19■□□□□ 0.82
NELFEP18615 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NELFEP18615 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NELFEP18615 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NELFEP18615 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NELFEP18615 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NELFEP18615 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
NELFEP18615 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.19■□□□□ 0.82
NELFEP18615 AC007322.4-201ENST00000509611 723 ntBASIC20.19■□□□□ 0.82
NELFEP18615 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
NELFEP18615 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NELFEP18615 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NELFEP18615 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NELFEP18615 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NELFEP18615 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms