Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
PDE6GP18545 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC12.76□□□□□ -0.37
PDE6GP18545 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 AL592293.1-201ENST00000502889 1188 ntBASIC12.76□□□□□ -0.37
PDE6GP18545 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC12.76□□□□□ -0.37
PDE6GP18545 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 AC121338.2-201ENST00000622535 1744 ntBASIC12.76□□□□□ -0.37
PDE6GP18545 AC099778.1-201ENST00000568593 1911 ntBASIC12.76□□□□□ -0.37
PDE6GP18545 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC12.76□□□□□ -0.37
PDE6GP18545 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC12.76□□□□□ -0.37
PDE6GP18545 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PDE6GP18545 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PDE6GP18545 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
PDE6GP18545 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
PDE6GP18545 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
PDE6GP18545 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
PDE6GP18545 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
PDE6GP18545 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
PDE6GP18545 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
PDE6GP18545 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
PDE6GP18545 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 IDNK-203ENST00000405990 629 ntTSL 2 BASIC12.75□□□□□ -0.37
PDE6GP18545 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
PDE6GP18545 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC12.75□□□□□ -0.37
PDE6GP18545 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
PDE6GP18545 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
PDE6GP18545 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
PDE6GP18545 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PDE6GP18545 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PDE6GP18545 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC12.74□□□□□ -0.37
PDE6GP18545 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
PDE6GP18545 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
PDE6GP18545 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC12.74□□□□□ -0.37
PDE6GP18545 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC12.74□□□□□ -0.37
PDE6GP18545 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC12.74□□□□□ -0.37
PDE6GP18545 CR559946.2-201ENST00000623684 991 ntBASIC12.74□□□□□ -0.37
PDE6GP18545 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
PDE6GP18545 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC12.74□□□□□ -0.37
PDE6GP18545 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
PDE6GP18545 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC12.74□□□□□ -0.37
PDE6GP18545 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6GP18545 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
PDE6GP18545 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6GP18545 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC12.73□□□□□ -0.37
PDE6GP18545 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC12.73□□□□□ -0.37
PDE6GP18545 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
PDE6GP18545 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6GP18545 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms