Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.84■■□□□ 1.41
BMP3P12645 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.84■■□□□ 1.41
BMP3P12645 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.84■■□□□ 1.41
BMP3P12645 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
BMP3P12645 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.84■■□□□ 1.41
BMP3P12645 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
BMP3P12645 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
BMP3P12645 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
BMP3P12645 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.83■■□□□ 1.41
BMP3P12645 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.83■■□□□ 1.41
BMP3P12645 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.83■■□□□ 1.41
BMP3P12645 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
BMP3P12645 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
BMP3P12645 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.83■■□□□ 1.41
BMP3P12645 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
BMP3P12645 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
BMP3P12645 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
BMP3P12645 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
BMP3P12645 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.82■■□□□ 1.4
BMP3P12645 AC008687.6-201ENST00000596318 630 ntBASIC23.82■■□□□ 1.4
BMP3P12645 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BMP3P12645 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BMP3P12645 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
BMP3P12645 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BMP3P12645 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
BMP3P12645 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
BMP3P12645 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.81■■□□□ 1.4
BMP3P12645 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.81■■□□□ 1.4
BMP3P12645 PRORSD1P-201ENST00000295112 541 ntBASIC23.81■■□□□ 1.4
BMP3P12645 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
BMP3P12645 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
BMP3P12645 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.81■■□□□ 1.4
BMP3P12645 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BMP3P12645 AC026366.1-201ENST00000488803 879 ntBASIC23.81■■□□□ 1.4
BMP3P12645 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BMP3P12645 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.81■■□□□ 1.4
BMP3P12645 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
BMP3P12645 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.81■■□□□ 1.4
BMP3P12645 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
BMP3P12645 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BMP3P12645 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.8■■□□□ 1.4
BMP3P12645 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.8■■□□□ 1.4
BMP3P12645 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BMP3P12645 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BMP3P12645 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BMP3P12645 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BMP3P12645 PGM5P4-201ENST00000421970 445 ntBASIC23.8■■□□□ 1.4
BMP3P12645 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.8■■□□□ 1.4
BMP3P12645 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.8■■□□□ 1.4
BMP3P12645 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BMP3P12645 AC006058.3-201ENST00000606217 1069 ntBASIC23.8■■□□□ 1.4
BMP3P12645 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
BMP3P12645 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
BMP3P12645 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
BMP3P12645 AC011484.1-201ENST00000377652 1995 ntBASIC23.8■■□□□ 1.4
BMP3P12645 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BMP3P12645 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.79■■□□□ 1.4
BMP3P12645 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BMP3P12645 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
BMP3P12645 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BMP3P12645 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.79■■□□□ 1.4
BMP3P12645 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BMP3P12645 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BMP3P12645 AP003097.1-201ENST00000530657 1135 ntBASIC23.79■■□□□ 1.4
BMP3P12645 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
BMP3P12645 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BMP3P12645 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
BMP3P12645 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
BMP3P12645 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BMP3P12645 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.78■■□□□ 1.4
BMP3P12645 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.78■■□□□ 1.4
BMP3P12645 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BMP3P12645 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BMP3P12645 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.78■■□□□ 1.4
BMP3P12645 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BMP3P12645 PNMA6B-201ENST00000538162 1200 ntBASIC23.78■■□□□ 1.4
BMP3P12645 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BMP3P12645 C2orf69P4-201ENST00000565394 541 ntBASIC23.78■■□□□ 1.4
BMP3P12645 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
BMP3P12645 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.78■■□□□ 1.4
BMP3P12645 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
BMP3P12645 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.78■■□□□ 1.4
BMP3P12645 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BMP3P12645 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.78■■□□□ 1.4
BMP3P12645 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BMP3P12645 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
BMP3P12645 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BMP3P12645 AC092368.3-202ENST00000574180 1591 ntBASIC23.78■■□□□ 1.4
BMP3P12645 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BMP3P12645 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BMP3P12645 AL024507.2-201ENST00000606070 2574 ntBASIC23.77■■□□□ 1.4
BMP3P12645 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
BMP3P12645 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.77■■□□□ 1.4
BMP3P12645 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
BMP3P12645 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.77■■□□□ 1.4
BMP3P12645 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.77■■□□□ 1.4
BMP3P12645 AL356652.1-201ENST00000615962 565 ntBASIC23.77■■□□□ 1.4
BMP3P12645 AC066615.1-201ENST00000640911 628 ntBASIC23.77■■□□□ 1.4
BMP3P12645 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BMP3P12645 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms