Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRFP11831 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SRFP11831 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.04■□□□□ 0.96
SRFP11831 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SRFP11831 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRFP11831 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRFP11831 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SRFP11831 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRFP11831 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SRFP11831 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRFP11831 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.03■□□□□ 0.96
SRFP11831 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRFP11831 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRFP11831 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SRFP11831 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.03■□□□□ 0.96
SRFP11831 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.03■□□□□ 0.96
SRFP11831 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SRFP11831 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SRFP11831 AL445228.2-201ENST00000605589 952 ntBASIC21.03■□□□□ 0.96
SRFP11831 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.03■□□□□ 0.96
SRFP11831 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SRFP11831 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.03■□□□□ 0.96
SRFP11831 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SRFP11831 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.02■□□□□ 0.96
SRFP11831 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRFP11831 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRFP11831 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SRFP11831 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.02■□□□□ 0.96
SRFP11831 TMPOP1-202ENST00000424642 1267 ntBASIC21.02■□□□□ 0.96
SRFP11831 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SRFP11831 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.02■□□□□ 0.96
SRFP11831 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
SRFP11831 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SRFP11831 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.02■□□□□ 0.96
SRFP11831 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SRFP11831 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SRFP11831 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SRFP11831 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRFP11831 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRFP11831 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRFP11831 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRFP11831 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SRFP11831 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRFP11831 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRFP11831 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRFP11831 AC026471.5-201ENST00000615068 467 ntBASIC21.01■□□□□ 0.95
SRFP11831 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRFP11831 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.01■□□□□ 0.95
SRFP11831 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21■□□□□ 0.95
SRFP11831 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SRFP11831 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
SRFP11831 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21■□□□□ 0.95
SRFP11831 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
SRFP11831 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21■□□□□ 0.95
SRFP11831 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21■□□□□ 0.95
SRFP11831 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SRFP11831 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRFP11831 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRFP11831 AL353708.3-201ENST00000610272 989 ntBASIC21■□□□□ 0.95
SRFP11831 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SRFP11831 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRFP11831 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRFP11831 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
SRFP11831 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRFP11831 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SRFP11831 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.99■□□□□ 0.95
SRFP11831 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SRFP11831 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SRFP11831 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SRFP11831 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRFP11831 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRFP11831 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.99■□□□□ 0.95
SRFP11831 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRFP11831 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.99■□□□□ 0.95
SRFP11831 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRFP11831 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.99■□□□□ 0.95
SRFP11831 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.99■□□□□ 0.95
SRFP11831 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.98■□□□□ 0.95
SRFP11831 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRFP11831 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.98■□□□□ 0.95
SRFP11831 AP003071.4-201ENST00000562276 1284 ntBASIC20.98■□□□□ 0.95
SRFP11831 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.98■□□□□ 0.95
SRFP11831 RN7SL850P-201ENST00000579959 291 ntBASIC20.98■□□□□ 0.95
SRFP11831 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.98■□□□□ 0.95
SRFP11831 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRFP11831 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.98■□□□□ 0.95
SRFP11831 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.97■□□□□ 0.95
SRFP11831 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRFP11831 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRFP11831 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.97■□□□□ 0.95
SRFP11831 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRFP11831 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRFP11831 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.97■□□□□ 0.95
SRFP11831 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRFP11831 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRFP11831 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.97■□□□□ 0.95
SRFP11831 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.97■□□□□ 0.95
SRFP11831 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRFP11831 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.97■□□□□ 0.95
SRFP11831 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms