Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CXCL1P09341 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CXCL1P09341 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CXCL1P09341 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CXCL1P09341 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CXCL1P09341 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CXCL1P09341 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL1P09341 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL1P09341 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL1P09341 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL1P09341 AC004987.1-201ENST00000428627 508 ntBASIC15.93■□□□□ 0.14
CXCL1P09341 AC010980.1-201ENST00000587192 1142 ntBASIC15.93■□□□□ 0.14
CXCL1P09341 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL1P09341 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL1P09341 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.93■□□□□ 0.14
CXCL1P09341 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL1P09341 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.93■□□□□ 0.14
CXCL1P09341 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL1P09341 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL1P09341 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.93■□□□□ 0.14
CXCL1P09341 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL1P09341 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CXCL1P09341 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL1P09341 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.93■□□□□ 0.14
CXCL1P09341 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CXCL1P09341 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CXCL1P09341 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL1P09341 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL1P09341 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.92■□□□□ 0.14
CXCL1P09341 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL1P09341 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL1P09341 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.92■□□□□ 0.14
CXCL1P09341 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL1P09341 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL1P09341 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.92■□□□□ 0.14
CXCL1P09341 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.92■□□□□ 0.14
CXCL1P09341 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.92■□□□□ 0.14
CXCL1P09341 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL1P09341 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL1P09341 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL1P09341 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL1P09341 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL1P09341 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL1P09341 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL1P09341 AC005332.7-201ENST00000614046 2005 ntBASIC15.92■□□□□ 0.14
CXCL1P09341 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.92■□□□□ 0.14
CXCL1P09341 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CXCL1P09341 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL1P09341 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.92■□□□□ 0.14
CXCL1P09341 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.91■□□□□ 0.14
CXCL1P09341 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.91■□□□□ 0.14
CXCL1P09341 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CXCL1P09341 AC004687.1-201ENST00000579003 1625 ntBASIC15.91■□□□□ 0.14
CXCL1P09341 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.91■□□□□ 0.14
CXCL1P09341 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CXCL1P09341 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.91■□□□□ 0.14
CXCL1P09341 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.91■□□□□ 0.14
CXCL1P09341 AC020916.1-201ENST00000587762 1774 ntBASIC15.91■□□□□ 0.14
CXCL1P09341 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.91■□□□□ 0.14
CXCL1P09341 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.91■□□□□ 0.14
CXCL1P09341 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.91■□□□□ 0.14
CXCL1P09341 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CXCL1P09341 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
CXCL1P09341 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.91■□□□□ 0.14
CXCL1P09341 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.91■□□□□ 0.14
CXCL1P09341 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.91■□□□□ 0.14
CXCL1P09341 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.91■□□□□ 0.14
CXCL1P09341 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.91■□□□□ 0.14
CXCL1P09341 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.91■□□□□ 0.14
CXCL1P09341 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.91■□□□□ 0.14
CXCL1P09341 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CXCL1P09341 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL1P09341 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL1P09341 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CXCL1P09341 TCF3P1-201ENST00000423021 1937 ntBASIC15.9■□□□□ 0.14
CXCL1P09341 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCL1P09341 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CXCL1P09341 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL1P09341 AC007225.1-201ENST00000566331 1836 ntBASIC15.9■□□□□ 0.14
CXCL1P09341 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.9■□□□□ 0.14
CXCL1P09341 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL1P09341 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms