Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 AC007322.4-201ENST00000509611 723 ntBASIC20.43■□□□□ 0.86
CAPNS1P04632 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.43■□□□□ 0.86
CAPNS1P04632 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.43■□□□□ 0.86
CAPNS1P04632 AF106564.1-201ENST00000607058 2553 ntBASIC20.43■□□□□ 0.86
CAPNS1P04632 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.43■□□□□ 0.86
CAPNS1P04632 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CAPNS1P04632 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPNS1P04632 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.43■□□□□ 0.86
CAPNS1P04632 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CAPNS1P04632 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPNS1P04632 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPNS1P04632 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.42■□□□□ 0.86
CAPNS1P04632 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CAPNS1P04632 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPNS1P04632 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPNS1P04632 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPNS1P04632 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.42■□□□□ 0.86
CAPNS1P04632 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CAPNS1P04632 UBE2SP1-201ENST00000450587 669 ntBASIC20.42■□□□□ 0.86
CAPNS1P04632 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CAPNS1P04632 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CAPNS1P04632 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.42■□□□□ 0.86
CAPNS1P04632 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.42■□□□□ 0.86
CAPNS1P04632 AC073648.6-201ENST00000641589 218 ntBASIC20.42■□□□□ 0.86
CAPNS1P04632 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CAPNS1P04632 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.42■□□□□ 0.86
CAPNS1P04632 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPNS1P04632 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
CAPNS1P04632 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPNS1P04632 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CAPNS1P04632 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.41■□□□□ 0.86
CAPNS1P04632 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPNS1P04632 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CAPNS1P04632 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.41■□□□□ 0.86
CAPNS1P04632 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.41■□□□□ 0.86
CAPNS1P04632 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CAPNS1P04632 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.41■□□□□ 0.86
CAPNS1P04632 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.41■□□□□ 0.86
CAPNS1P04632 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.41■□□□□ 0.86
CAPNS1P04632 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CAPNS1P04632 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPNS1P04632 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.41■□□□□ 0.86
CAPNS1P04632 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPNS1P04632 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPNS1P04632 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPNS1P04632 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CAPNS1P04632 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.4■□□□□ 0.86
CAPNS1P04632 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CAPNS1P04632 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CAPNS1P04632 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CAPNS1P04632 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CAPNS1P04632 AC010141.2-201ENST00000452426 721 ntBASIC20.4■□□□□ 0.86
CAPNS1P04632 AC026366.1-201ENST00000488803 879 ntBASIC20.4■□□□□ 0.86
CAPNS1P04632 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.4■□□□□ 0.86
CAPNS1P04632 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CAPNS1P04632 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.4■□□□□ 0.86
CAPNS1P04632 AC007952.6-201ENST00000573168 2673 ntBASIC20.4■□□□□ 0.86
CAPNS1P04632 MIR4497-201ENST00000583208 89 ntBASIC20.4■□□□□ 0.86
CAPNS1P04632 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CAPNS1P04632 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CAPNS1P04632 AC003957.1-201ENST00000625108 2673 ntBASIC20.4■□□□□ 0.86
CAPNS1P04632 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CAPNS1P04632 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CAPNS1P04632 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CAPNS1P04632 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CAPNS1P04632 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.39■□□□□ 0.86
CAPNS1P04632 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CAPNS1P04632 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CAPNS1P04632 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CAPNS1P04632 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CAPNS1P04632 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CAPNS1P04632 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CAPNS1P04632 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CAPNS1P04632 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.39■□□□□ 0.85
CAPNS1P04632 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CAPNS1P04632 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CAPNS1P04632 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CAPNS1P04632 BX276092.2-201ENST00000417668 665 ntBASIC20.39■□□□□ 0.85
CAPNS1P04632 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.39■□□□□ 0.85
CAPNS1P04632 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CAPNS1P04632 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
CAPNS1P04632 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.39■□□□□ 0.85
CAPNS1P04632 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CAPNS1P04632 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.38■□□□□ 0.85
CAPNS1P04632 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CAPNS1P04632 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CAPNS1P04632 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPNS1P04632 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPNS1P04632 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.38■□□□□ 0.85
CAPNS1P04632 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CAPNS1P04632 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.38■□□□□ 0.85
CAPNS1P04632 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CAPNS1P04632 AC091874.3-201ENST00000512672 1195 ntBASIC20.38■□□□□ 0.85
CAPNS1P04632 AC138907.5-202ENST00000569484 235 ntBASIC20.38■□□□□ 0.85
CAPNS1P04632 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPNS1P04632 REXO1L12P-201ENST00000622156 912 ntBASIC20.38■□□□□ 0.85
CAPNS1P04632 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPNS1P04632 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CAPNS1P04632 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CAPNS1P04632 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms