Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SMUG1P1-201ENST00000590640 811 ntBASIC20.89■□□□□ 0.93
MT-ND3P03897 AC022517.1-201ENST00000592429 346 ntBASIC20.89■□□□□ 0.93
MT-ND3P03897 AC007225.1-201ENST00000566331 1836 ntBASIC20.89■□□□□ 0.93
MT-ND3P03897 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
MT-ND3P03897 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MT-ND3P03897 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MT-ND3P03897 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.89■□□□□ 0.93
MT-ND3P03897 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.89■□□□□ 0.93
MT-ND3P03897 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
MT-ND3P03897 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
MT-ND3P03897 PCDHAC2-203ENST00000615316 3011 ntBASIC20.88■□□□□ 0.93
MT-ND3P03897 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MT-ND3P03897 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MT-ND3P03897 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.88■□□□□ 0.93
MT-ND3P03897 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.88■□□□□ 0.93
MT-ND3P03897 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MT-ND3P03897 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MT-ND3P03897 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.88■□□□□ 0.93
MT-ND3P03897 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.88■□□□□ 0.93
MT-ND3P03897 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.88■□□□□ 0.93
MT-ND3P03897 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.88■□□□□ 0.93
MT-ND3P03897 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.88■□□□□ 0.93
MT-ND3P03897 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
MT-ND3P03897 CCDC92B-201ENST00000575506 885 ntBASIC20.88■□□□□ 0.93
MT-ND3P03897 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.88■□□□□ 0.93
MT-ND3P03897 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.88■□□□□ 0.93
MT-ND3P03897 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MT-ND3P03897 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
MT-ND3P03897 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.88■□□□□ 0.93
MT-ND3P03897 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MT-ND3P03897 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.88■□□□□ 0.93
MT-ND3P03897 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
MT-ND3P03897 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
MT-ND3P03897 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MT-ND3P03897 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MT-ND3P03897 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.87■□□□□ 0.93
MT-ND3P03897 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MT-ND3P03897 AC020907.5-201ENST00000624372 1936 ntBASIC20.87■□□□□ 0.93
MT-ND3P03897 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MT-ND3P03897 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.87■□□□□ 0.93
MT-ND3P03897 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.87■□□□□ 0.93
MT-ND3P03897 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MT-ND3P03897 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.87■□□□□ 0.93
MT-ND3P03897 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.87■□□□□ 0.93
MT-ND3P03897 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
MT-ND3P03897 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.87■□□□□ 0.93
MT-ND3P03897 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.87■□□□□ 0.93
MT-ND3P03897 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MT-ND3P03897 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.86■□□□□ 0.93
MT-ND3P03897 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.86■□□□□ 0.93
MT-ND3P03897 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.86■□□□□ 0.93
MT-ND3P03897 KRT18P14-201ENST00000534205 1250 ntBASIC20.86■□□□□ 0.93
MT-ND3P03897 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.86■□□□□ 0.93
MT-ND3P03897 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.86■□□□□ 0.93
MT-ND3P03897 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.86■□□□□ 0.93
MT-ND3P03897 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
MT-ND3P03897 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.86■□□□□ 0.93
MT-ND3P03897 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
MT-ND3P03897 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MT-ND3P03897 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.85■□□□□ 0.93
MT-ND3P03897 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MT-ND3P03897 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
MT-ND3P03897 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
MT-ND3P03897 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.85■□□□□ 0.93
MT-ND3P03897 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
MT-ND3P03897 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
MT-ND3P03897 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.85■□□□□ 0.93
MT-ND3P03897 TERF1P2-201ENST00000583350 1212 ntBASIC20.85■□□□□ 0.93
MT-ND3P03897 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.85■□□□□ 0.93
MT-ND3P03897 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MT-ND3P03897 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MT-ND3P03897 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.85■□□□□ 0.93
MT-ND3P03897 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
MT-ND3P03897 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MT-ND3P03897 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
MT-ND3P03897 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MT-ND3P03897 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
MT-ND3P03897 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MT-ND3P03897 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MT-ND3P03897 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
MT-ND3P03897 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
MT-ND3P03897 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
MT-ND3P03897 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MT-ND3P03897 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
MT-ND3P03897 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MT-ND3P03897 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms