Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.53■■□□□ 1.2
CHRNA1P02708 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CHRNA1P02708 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNA1P02708 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNA1P02708 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNA1P02708 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNA1P02708 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.53■■□□□ 1.2
CHRNA1P02708 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.53■■□□□ 1.2
CHRNA1P02708 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNA1P02708 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNA1P02708 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHRNA1P02708 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.52■■□□□ 1.2
CHRNA1P02708 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CHRNA1P02708 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.52■■□□□ 1.2
CHRNA1P02708 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
CHRNA1P02708 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.52■■□□□ 1.2
CHRNA1P02708 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.52■■□□□ 1.2
CHRNA1P02708 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CHRNA1P02708 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CHRNA1P02708 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.52■■□□□ 1.2
CHRNA1P02708 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHRNA1P02708 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.52■■□□□ 1.2
CHRNA1P02708 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.52■■□□□ 1.2
CHRNA1P02708 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
CHRNA1P02708 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
CHRNA1P02708 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNA1P02708 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNA1P02708 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNA1P02708 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.51■■□□□ 1.19
CHRNA1P02708 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNA1P02708 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNA1P02708 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNA1P02708 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNA1P02708 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNA1P02708 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNA1P02708 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNA1P02708 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNA1P02708 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.51■■□□□ 1.19
CHRNA1P02708 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNA1P02708 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNA1P02708 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNA1P02708 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNA1P02708 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNA1P02708 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNA1P02708 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNA1P02708 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.5■■□□□ 1.19
CHRNA1P02708 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CHRNA1P02708 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.5■■□□□ 1.19
CHRNA1P02708 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNA1P02708 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.5■■□□□ 1.19
CHRNA1P02708 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNA1P02708 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNA1P02708 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNA1P02708 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CHRNA1P02708 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.49■■□□□ 1.19
CHRNA1P02708 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHRNA1P02708 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHRNA1P02708 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.49■■□□□ 1.19
CHRNA1P02708 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHRNA1P02708 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.49■■□□□ 1.19
CHRNA1P02708 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
CHRNA1P02708 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.49■■□□□ 1.19
CHRNA1P02708 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.49■■□□□ 1.19
CHRNA1P02708 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.49■■□□□ 1.19
CHRNA1P02708 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.49■■□□□ 1.19
CHRNA1P02708 Z99916.2-201ENST00000604037 246 ntBASIC22.49■■□□□ 1.19
CHRNA1P02708 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.49■■□□□ 1.19
CHRNA1P02708 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHRNA1P02708 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHRNA1P02708 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.48■■□□□ 1.19
CHRNA1P02708 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
CHRNA1P02708 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.48■■□□□ 1.19
CHRNA1P02708 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CHRNA1P02708 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.48■■□□□ 1.19
CHRNA1P02708 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHRNA1P02708 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.48■■□□□ 1.19
CHRNA1P02708 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CHRNA1P02708 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
CHRNA1P02708 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHRNA1P02708 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.47■■□□□ 1.19
CHRNA1P02708 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHRNA1P02708 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHRNA1P02708 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHRNA1P02708 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHRNA1P02708 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CHRNA1P02708 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.47■■□□□ 1.19
CHRNA1P02708 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
CHRNA1P02708 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.47■■□□□ 1.19
CHRNA1P02708 ECEL1P1-201ENST00000373592 1742 ntBASIC22.47■■□□□ 1.19
CHRNA1P02708 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CHRNA1P02708 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CHRNA1P02708 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
CHRNA1P02708 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.47■■□□□ 1.19
CHRNA1P02708 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHRNA1P02708 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHRNA1P02708 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CHRNA1P02708 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHRNA1P02708 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHRNA1P02708 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.46■■□□□ 1.19
CHRNA1P02708 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms