Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-AP01891 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
HLA-AP01891 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-AP01891 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-AP01891 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-AP01891 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-AP01891 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HLA-AP01891 AC098818.2-201ENST00000564925 2320 ntBASIC17.32■□□□□ 0.36
HLA-AP01891 AC116562.4-201ENST00000641316 2276 ntBASIC17.32■□□□□ 0.36
HLA-AP01891 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-AP01891 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-AP01891 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
HLA-AP01891 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-AP01891 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-AP01891 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-AP01891 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.32■□□□□ 0.36
HLA-AP01891 AC131212.1-201ENST00000613771 668 ntBASIC17.32■□□□□ 0.36
HLA-AP01891 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-AP01891 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-AP01891 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-AP01891 AP004607.7-201ENST00000527152 1677 ntBASIC17.32■□□□□ 0.36
HLA-AP01891 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-AP01891 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-AP01891 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-AP01891 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-AP01891 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
HLA-AP01891 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-AP01891 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-AP01891 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-AP01891 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-AP01891 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-AP01891 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-AP01891 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.31■□□□□ 0.36
HLA-AP01891 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-AP01891 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-AP01891 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-AP01891 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HLA-AP01891 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-AP01891 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-AP01891 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-AP01891 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-AP01891 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-AP01891 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-AP01891 FP700111.2-201ENST00000619190 1892 ntBASIC17.31■□□□□ 0.36
HLA-AP01891 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HLA-AP01891 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-AP01891 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HLA-AP01891 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-AP01891 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-AP01891 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-AP01891 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-AP01891 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-AP01891 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-AP01891 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-AP01891 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-AP01891 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-AP01891 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-AP01891 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.3■□□□□ 0.36
HLA-AP01891 MIR3621-201ENST00000580529 85 ntBASIC17.3■□□□□ 0.36
HLA-AP01891 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-AP01891 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-AP01891 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-AP01891 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HLA-AP01891 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-AP01891 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-AP01891 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.3■□□□□ 0.36
HLA-AP01891 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-AP01891 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-AP01891 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HLA-AP01891 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-AP01891 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-AP01891 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-AP01891 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-AP01891 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-AP01891 AIRN-201ENST00000601203 4374 ntBASIC17.29■□□□□ 0.36
HLA-AP01891 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-AP01891 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-AP01891 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-AP01891 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-AP01891 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-AP01891 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.29■□□□□ 0.36
HLA-AP01891 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-AP01891 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-AP01891 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-AP01891 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-AP01891 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-AP01891 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
HLA-AP01891 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-AP01891 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-AP01891 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
HLA-AP01891 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-AP01891 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-AP01891 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-AP01891 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 AC010141.3-201ENST00000456659 717 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms