Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.03■■□□□ 1.28
PGK1P00558 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.03■■□□□ 1.28
PGK1P00558 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.03■■□□□ 1.28
PGK1P00558 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PGK1P00558 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PGK1P00558 AC006557.6-201ENST00000623071 864 ntBASIC23.03■■□□□ 1.28
PGK1P00558 AL049637.2-201ENST00000641778 930 ntBASIC23.03■■□□□ 1.28
PGK1P00558 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PGK1P00558 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PGK1P00558 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PGK1P00558 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PGK1P00558 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PGK1P00558 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.03■■□□□ 1.28
PGK1P00558 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PGK1P00558 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PGK1P00558 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PGK1P00558 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PGK1P00558 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PGK1P00558 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PGK1P00558 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
PGK1P00558 AC239809.2-201ENST00000415381 517 ntBASIC23.02■■□□□ 1.28
PGK1P00558 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.02■■□□□ 1.28
PGK1P00558 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PGK1P00558 TSPY15P-201ENST00000457163 923 ntBASIC23.02■■□□□ 1.28
PGK1P00558 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PGK1P00558 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.02■■□□□ 1.28
PGK1P00558 AC120498.8-201ENST00000614275 531 ntBASIC23.02■■□□□ 1.28
PGK1P00558 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
PGK1P00558 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PGK1P00558 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PGK1P00558 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PGK1P00558 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PGK1P00558 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.02■■□□□ 1.28
PGK1P00558 KRT17P2-201ENST00000300992 1314 ntBASIC23.02■■□□□ 1.28
PGK1P00558 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
PGK1P00558 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.01■■□□□ 1.27
PGK1P00558 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PGK1P00558 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PGK1P00558 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PGK1P00558 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PGK1P00558 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
PGK1P00558 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PGK1P00558 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.01■■□□□ 1.27
PGK1P00558 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.01■■□□□ 1.27
PGK1P00558 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PGK1P00558 AC133681.1-201ENST00000465482 601 ntBASIC23.01■■□□□ 1.27
PGK1P00558 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.01■■□□□ 1.27
PGK1P00558 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PGK1P00558 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.01■■□□□ 1.27
PGK1P00558 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PGK1P00558 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PGK1P00558 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PGK1P00558 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PGK1P00558 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PGK1P00558 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.01■■□□□ 1.27
PGK1P00558 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23■■□□□ 1.27
PGK1P00558 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
PGK1P00558 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
PGK1P00558 MAX-217ENST00000557277 728 ntTSL 3 BASIC23■■□□□ 1.27
PGK1P00558 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23■■□□□ 1.27
PGK1P00558 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23■■□□□ 1.27
PGK1P00558 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23■■□□□ 1.27
PGK1P00558 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PGK1P00558 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PGK1P00558 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PGK1P00558 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23■■□□□ 1.27
PGK1P00558 AC087633.2-202ENST00000565166 1439 ntBASIC22.99■■□□□ 1.27
PGK1P00558 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
PGK1P00558 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
PGK1P00558 KRASP1-201ENST00000407852 552 ntBASIC22.99■■□□□ 1.27
PGK1P00558 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PGK1P00558 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.99■■□□□ 1.27
PGK1P00558 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PGK1P00558 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
PGK1P00558 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.99■■□□□ 1.27
PGK1P00558 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.99■■□□□ 1.27
PGK1P00558 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PGK1P00558 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PGK1P00558 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.98■■□□□ 1.27
PGK1P00558 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PGK1P00558 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PGK1P00558 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PGK1P00558 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.98■■□□□ 1.27
PGK1P00558 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.98■■□□□ 1.27
PGK1P00558 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PGK1P00558 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
PGK1P00558 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PGK1P00558 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PGK1P00558 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.98■■□□□ 1.27
PGK1P00558 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
PGK1P00558 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PGK1P00558 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PGK1P00558 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.98■■□□□ 1.27
PGK1P00558 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
PGK1P00558 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PGK1P00558 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.98■■□□□ 1.27
PGK1P00558 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.98■■□□□ 1.27
PGK1P00558 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PGK1P00558 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PGK1P00558 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms