Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 MIR663A-201ENST00000385250 93 ntBASIC21.58■■□□□ 1.05
TRUB2O95900 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.58■■□□□ 1.05
TRUB2O95900 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.58■■□□□ 1.05
TRUB2O95900 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.58■■□□□ 1.05
TRUB2O95900 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRUB2O95900 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.58■■□□□ 1.05
TRUB2O95900 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.58■■□□□ 1.05
TRUB2O95900 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRUB2O95900 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRUB2O95900 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRUB2O95900 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRUB2O95900 AC011484.1-201ENST00000377652 1995 ntBASIC21.57■■□□□ 1.04
TRUB2O95900 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.57■■□□□ 1.04
TRUB2O95900 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
TRUB2O95900 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.57■■□□□ 1.04
TRUB2O95900 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.57■■□□□ 1.04
TRUB2O95900 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.57■■□□□ 1.04
TRUB2O95900 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB2O95900 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TRUB2O95900 AL157384.1-201ENST00000445995 2473 ntBASIC21.56■■□□□ 1.04
TRUB2O95900 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TRUB2O95900 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB2O95900 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB2O95900 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TRUB2O95900 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB2O95900 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB2O95900 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB2O95900 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB2O95900 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB2O95900 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB2O95900 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.56■■□□□ 1.04
TRUB2O95900 AL162412.1-201ENST00000567129 965 ntBASIC21.56■■□□□ 1.04
TRUB2O95900 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB2O95900 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.56■■□□□ 1.04
TRUB2O95900 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.56■■□□□ 1.04
TRUB2O95900 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TRUB2O95900 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB2O95900 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB2O95900 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB2O95900 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRUB2O95900 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRUB2O95900 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.55■■□□□ 1.04
TRUB2O95900 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
TRUB2O95900 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TRUB2O95900 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.55■■□□□ 1.04
TRUB2O95900 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRUB2O95900 CYP2T1P-201ENST00000432607 1285 ntBASIC21.55■■□□□ 1.04
TRUB2O95900 AL050303.2-201ENST00000619798 666 ntBASIC21.55■■□□□ 1.04
TRUB2O95900 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TRUB2O95900 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRUB2O95900 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRUB2O95900 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.55■■□□□ 1.04
TRUB2O95900 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.55■■□□□ 1.04
TRUB2O95900 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRUB2O95900 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRUB2O95900 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.54■■□□□ 1.04
TRUB2O95900 AC116050.2-201ENST00000612102 1779 ntBASIC21.54■■□□□ 1.04
TRUB2O95900 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
TRUB2O95900 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRUB2O95900 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRUB2O95900 AC006970.2-201ENST00000450065 779 ntBASIC21.54■■□□□ 1.04
TRUB2O95900 CDV3P1-201ENST00000471403 739 ntBASIC21.54■■□□□ 1.04
TRUB2O95900 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.54■■□□□ 1.04
TRUB2O95900 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TRUB2O95900 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.54■■□□□ 1.04
TRUB2O95900 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRUB2O95900 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.54■■□□□ 1.04
TRUB2O95900 AC016405.3-201ENST00000607710 860 ntBASIC21.54■■□□□ 1.04
TRUB2O95900 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.54■■□□□ 1.04
TRUB2O95900 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRUB2O95900 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRUB2O95900 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRUB2O95900 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.54■■□□□ 1.04
TRUB2O95900 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TRUB2O95900 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.54■■□□□ 1.04
TRUB2O95900 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.54■■□□□ 1.04
TRUB2O95900 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRUB2O95900 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRUB2O95900 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRUB2O95900 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRUB2O95900 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TRUB2O95900 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.53■■□□□ 1.04
TRUB2O95900 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms