Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTP4A3O75365 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PTP4A3O75365 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTP4A3O75365 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTP4A3O75365 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.54■□□□□ 0.56
PTP4A3O75365 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PTP4A3O75365 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTP4A3O75365 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PTP4A3O75365 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTP4A3O75365 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
PTP4A3O75365 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTP4A3O75365 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTP4A3O75365 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTP4A3O75365 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTP4A3O75365 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTP4A3O75365 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.53■□□□□ 0.56
PTP4A3O75365 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTP4A3O75365 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTP4A3O75365 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PTP4A3O75365 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTP4A3O75365 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTP4A3O75365 SLC7A5P2-201ENST00000553010 536 ntBASIC18.53■□□□□ 0.56
PTP4A3O75365 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.53■□□□□ 0.56
PTP4A3O75365 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTP4A3O75365 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PTP4A3O75365 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
PTP4A3O75365 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
PTP4A3O75365 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTP4A3O75365 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
PTP4A3O75365 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PTP4A3O75365 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.53■□□□□ 0.56
PTP4A3O75365 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PTP4A3O75365 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.52■□□□□ 0.56
PTP4A3O75365 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.52■□□□□ 0.56
PTP4A3O75365 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.52■□□□□ 0.56
PTP4A3O75365 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTP4A3O75365 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.52■□□□□ 0.56
PTP4A3O75365 AC123595.1-201ENST00000440769 1046 ntBASIC18.52■□□□□ 0.56
PTP4A3O75365 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.52■□□□□ 0.56
PTP4A3O75365 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.52■□□□□ 0.56
PTP4A3O75365 DUX4L2-201ENST00000561772 1275 ntBASIC18.52■□□□□ 0.56
PTP4A3O75365 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.52■□□□□ 0.56
PTP4A3O75365 AC104187.1-201ENST00000607510 612 ntBASIC18.52■□□□□ 0.56
PTP4A3O75365 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.52■□□□□ 0.56
PTP4A3O75365 DUX4L6-201ENST00000626483 1275 ntBASIC18.52■□□□□ 0.56
PTP4A3O75365 DUX4L1-201ENST00000627662 1275 ntBASIC18.52■□□□□ 0.56
PTP4A3O75365 DUX4L8-201ENST00000629013 1275 ntBASIC18.52■□□□□ 0.56
PTP4A3O75365 DUX4L3-201ENST00000630187 1275 ntBASIC18.52■□□□□ 0.56
PTP4A3O75365 DUX4L7-201ENST00000630678 1275 ntBASIC18.52■□□□□ 0.56
PTP4A3O75365 DUX4L5-201ENST00000630834 1275 ntBASIC18.52■□□□□ 0.56
PTP4A3O75365 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTP4A3O75365 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTP4A3O75365 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTP4A3O75365 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.52■□□□□ 0.55
PTP4A3O75365 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTP4A3O75365 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTP4A3O75365 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTP4A3O75365 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PTP4A3O75365 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTP4A3O75365 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTP4A3O75365 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTP4A3O75365 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.51■□□□□ 0.55
PTP4A3O75365 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTP4A3O75365 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTP4A3O75365 AP001160.3-201ENST00000601484 763 ntBASIC18.51■□□□□ 0.55
PTP4A3O75365 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.51■□□□□ 0.55
PTP4A3O75365 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PTP4A3O75365 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.51■□□□□ 0.55
PTP4A3O75365 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTP4A3O75365 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTP4A3O75365 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTP4A3O75365 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.51■□□□□ 0.55
PTP4A3O75365 AC099778.1-201ENST00000568593 1911 ntBASIC18.51■□□□□ 0.55
PTP4A3O75365 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTP4A3O75365 AC092720.2-201ENST00000602388 1665 ntBASIC18.5■□□□□ 0.55
PTP4A3O75365 AC116050.2-201ENST00000612102 1779 ntBASIC18.5■□□□□ 0.55
PTP4A3O75365 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PTP4A3O75365 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTP4A3O75365 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTP4A3O75365 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.5■□□□□ 0.55
PTP4A3O75365 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTP4A3O75365 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.5■□□□□ 0.55
PTP4A3O75365 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.5■□□□□ 0.55
PTP4A3O75365 MIR2861-201ENST00000636310 90 ntBASIC18.5■□□□□ 0.55
PTP4A3O75365 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTP4A3O75365 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTP4A3O75365 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTP4A3O75365 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTP4A3O75365 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.5■□□□□ 0.55
PTP4A3O75365 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.5■□□□□ 0.55
PTP4A3O75365 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.5■□□□□ 0.55
PTP4A3O75365 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTP4A3O75365 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTP4A3O75365 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.49■□□□□ 0.55
PTP4A3O75365 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTP4A3O75365 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTP4A3O75365 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.49■□□□□ 0.55
PTP4A3O75365 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
PTP4A3O75365 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PTP4A3O75365 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms