Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC26.53■■□□□ 1.84
PTCD1O75127 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PTCD1O75127 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
PTCD1O75127 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
PTCD1O75127 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC26.53■■□□□ 1.84
PTCD1O75127 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PTCD1O75127 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.53■■□□□ 1.84
PTCD1O75127 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PTCD1O75127 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PTCD1O75127 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PTCD1O75127 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC26.52■■□□□ 1.84
PTCD1O75127 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
PTCD1O75127 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PTCD1O75127 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PTCD1O75127 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PTCD1O75127 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PTCD1O75127 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PTCD1O75127 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC26.52■■□□□ 1.84
PTCD1O75127 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.52■■□□□ 1.84
PTCD1O75127 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.52■■□□□ 1.84
PTCD1O75127 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.52■■□□□ 1.84
PTCD1O75127 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PTCD1O75127 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC26.52■■□□□ 1.84
PTCD1O75127 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PTCD1O75127 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
PTCD1O75127 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PTCD1O75127 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PTCD1O75127 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PTCD1O75127 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC26.51■■□□□ 1.83
PTCD1O75127 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.51■■□□□ 1.83
PTCD1O75127 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
PTCD1O75127 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC26.51■■□□□ 1.83
PTCD1O75127 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PTCD1O75127 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PTCD1O75127 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
PTCD1O75127 ECEL1P3-201ENST00000427961 737 ntBASIC26.51■■□□□ 1.83
PTCD1O75127 TK2-204ENST00000525974 1178 ntTSL 2 BASIC26.51■■□□□ 1.83
PTCD1O75127 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
PTCD1O75127 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PTCD1O75127 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PTCD1O75127 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
PTCD1O75127 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
PTCD1O75127 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PTCD1O75127 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTCD1O75127 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTCD1O75127 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PTCD1O75127 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
PTCD1O75127 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PTCD1O75127 AC087633.2-202ENST00000565166 1439 ntBASIC26.5■■□□□ 1.83
PTCD1O75127 AC233723.2-201ENST00000623798 2106 ntBASIC26.5■■□□□ 1.83
PTCD1O75127 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTCD1O75127 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTCD1O75127 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
PTCD1O75127 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTCD1O75127 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PTCD1O75127 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
PTCD1O75127 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTCD1O75127 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
PTCD1O75127 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PTCD1O75127 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.49■■□□□ 1.83
PTCD1O75127 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PTCD1O75127 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PTCD1O75127 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26.49■■□□□ 1.83
PTCD1O75127 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
PTCD1O75127 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.49■■□□□ 1.83
PTCD1O75127 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PTCD1O75127 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PTCD1O75127 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PTCD1O75127 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PTCD1O75127 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PTCD1O75127 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC26.49■■□□□ 1.83
PTCD1O75127 MTDHP1-201ENST00000605323 784 ntBASIC26.49■■□□□ 1.83
PTCD1O75127 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PTCD1O75127 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PTCD1O75127 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTCD1O75127 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTCD1O75127 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PTCD1O75127 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PTCD1O75127 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTCD1O75127 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC26.48■■□□□ 1.83
PTCD1O75127 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PTCD1O75127 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTCD1O75127 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.48■■□□□ 1.83
PTCD1O75127 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTCD1O75127 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTCD1O75127 AC006557.6-201ENST00000623071 864 ntBASIC26.48■■□□□ 1.83
PTCD1O75127 AC073912.3-201ENST00000624414 853 ntBASIC26.48■■□□□ 1.83
PTCD1O75127 AL023875.1-201ENST00000640777 796 ntBASIC26.48■■□□□ 1.83
PTCD1O75127 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PTCD1O75127 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTCD1O75127 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PTCD1O75127 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.48■■□□□ 1.83
PTCD1O75127 GUSBP5-202ENST00000510805 1989 ntBASIC26.47■■□□□ 1.83
PTCD1O75127 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PTCD1O75127 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PTCD1O75127 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
PTCD1O75127 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.47■■□□□ 1.83
PTCD1O75127 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
PTCD1O75127 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
PTCD1O75127 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms