Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.83■□□□□ 0.77
PRAMEF4O60810 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF4O60810 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.83■□□□□ 0.77
PRAMEF4O60810 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.83■□□□□ 0.77
PRAMEF4O60810 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.83■□□□□ 0.77
PRAMEF4O60810 AC137761.2-201ENST00000561729 223 ntBASIC19.83■□□□□ 0.77
PRAMEF4O60810 AC145350.3-201ENST00000569033 163 ntBASIC19.83■□□□□ 0.77
PRAMEF4O60810 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PRAMEF4O60810 MFSD11-216ENST00000590393 1141 ntBASIC19.83■□□□□ 0.77
PRAMEF4O60810 MIR5787-201ENST00000611784 55 ntBASIC19.83■□□□□ 0.77
PRAMEF4O60810 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF4O60810 AC010536.3-201ENST00000620306 533 ntBASIC19.83■□□□□ 0.77
PRAMEF4O60810 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRAMEF4O60810 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRAMEF4O60810 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PRAMEF4O60810 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEF4O60810 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.82■□□□□ 0.76
PRAMEF4O60810 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEF4O60810 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PRAMEF4O60810 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PRAMEF4O60810 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEF4O60810 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.82■□□□□ 0.76
PRAMEF4O60810 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEF4O60810 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.82■□□□□ 0.76
PRAMEF4O60810 AC011767.1-201ENST00000617410 1153 ntBASIC19.82■□□□□ 0.76
PRAMEF4O60810 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEF4O60810 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.82■□□□□ 0.76
PRAMEF4O60810 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PRAMEF4O60810 GABARAPL3-202ENST00000624044 1851 ntBASIC19.82■□□□□ 0.76
PRAMEF4O60810 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF4O60810 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.81■□□□□ 0.76
PRAMEF4O60810 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PRAMEF4O60810 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PRAMEF4O60810 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PRAMEF4O60810 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF4O60810 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF4O60810 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.81■□□□□ 0.76
PRAMEF4O60810 TERF1P5-201ENST00000477545 1207 ntBASIC19.81■□□□□ 0.76
PRAMEF4O60810 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PRAMEF4O60810 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.81■□□□□ 0.76
PRAMEF4O60810 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF4O60810 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF4O60810 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.81■□□□□ 0.76
PRAMEF4O60810 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.81■□□□□ 0.76
PRAMEF4O60810 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF4O60810 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF4O60810 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF4O60810 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
PRAMEF4O60810 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PRAMEF4O60810 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF4O60810 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF4O60810 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF4O60810 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF4O60810 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PRAMEF4O60810 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF4O60810 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PRAMEF4O60810 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PRAMEF4O60810 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.8■□□□□ 0.76
PRAMEF4O60810 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
PRAMEF4O60810 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF4O60810 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF4O60810 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF4O60810 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF4O60810 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF4O60810 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF4O60810 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF4O60810 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF4O60810 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRAMEF4O60810 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRAMEF4O60810 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRAMEF4O60810 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PRAMEF4O60810 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRAMEF4O60810 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.79■□□□□ 0.76
PRAMEF4O60810 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRAMEF4O60810 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRAMEF4O60810 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.79■□□□□ 0.76
PRAMEF4O60810 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.79■□□□□ 0.76
PRAMEF4O60810 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.79■□□□□ 0.76
PRAMEF4O60810 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.79■□□□□ 0.76
PRAMEF4O60810 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRAMEF4O60810 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.79■□□□□ 0.76
PRAMEF4O60810 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.78■□□□□ 0.76
PRAMEF4O60810 AC020907.5-201ENST00000624372 1936 ntBASIC19.78■□□□□ 0.76
PRAMEF4O60810 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PRAMEF4O60810 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRAMEF4O60810 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.78■□□□□ 0.76
PRAMEF4O60810 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRAMEF4O60810 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
PRAMEF4O60810 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRAMEF4O60810 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRAMEF4O60810 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRAMEF4O60810 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRAMEF4O60810 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRAMEF4O60810 MIR935-201ENST00000401179 91 ntBASIC19.78■□□□□ 0.76
PRAMEF4O60810 CNN2P6-201ENST00000439038 900 ntBASIC19.78■□□□□ 0.76
PRAMEF4O60810 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PRAMEF4O60810 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRAMEF4O60810 DUX4L16-201ENST00000555130 1264 ntBASIC19.78■□□□□ 0.76
PRAMEF4O60810 AC022517.1-201ENST00000592429 346 ntBASIC19.78■□□□□ 0.76
PRAMEF4O60810 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms