Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZFC3H1O60293 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.37■□□□□ 0.85
ZFC3H1O60293 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
ZFC3H1O60293 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZFC3H1O60293 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.37■□□□□ 0.85
ZFC3H1O60293 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZFC3H1O60293 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ZFC3H1O60293 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZFC3H1O60293 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.37■□□□□ 0.85
ZFC3H1O60293 AL512625.2-201ENST00000417533 625 ntBASIC20.37■□□□□ 0.85
ZFC3H1O60293 AC010980.2-201ENST00000587099 1412 ntBASIC20.37■□□□□ 0.85
ZFC3H1O60293 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ZFC3H1O60293 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZFC3H1O60293 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZFC3H1O60293 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZFC3H1O60293 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZFC3H1O60293 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZFC3H1O60293 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.36■□□□□ 0.85
ZFC3H1O60293 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZFC3H1O60293 AC105036.2-201ENST00000569468 176 ntBASIC20.36■□□□□ 0.85
ZFC3H1O60293 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.36■□□□□ 0.85
ZFC3H1O60293 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ZFC3H1O60293 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZFC3H1O60293 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
ZFC3H1O60293 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.36■□□□□ 0.85
ZFC3H1O60293 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.36■□□□□ 0.85
ZFC3H1O60293 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.36■□□□□ 0.85
ZFC3H1O60293 AL355472.2-201ENST00000422958 438 ntBASIC20.35■□□□□ 0.85
ZFC3H1O60293 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.35■□□□□ 0.85
ZFC3H1O60293 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.35■□□□□ 0.85
ZFC3H1O60293 TMEM191A-211ENST00000637163 1067 ntBASIC20.35■□□□□ 0.85
ZFC3H1O60293 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZFC3H1O60293 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ZFC3H1O60293 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZFC3H1O60293 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZFC3H1O60293 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZFC3H1O60293 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZFC3H1O60293 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZFC3H1O60293 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZFC3H1O60293 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ZFC3H1O60293 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ZFC3H1O60293 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZFC3H1O60293 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZFC3H1O60293 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZFC3H1O60293 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZFC3H1O60293 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ZFC3H1O60293 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZFC3H1O60293 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.34■□□□□ 0.85
ZFC3H1O60293 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFC3H1O60293 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ZFC3H1O60293 BX276092.2-201ENST00000417668 665 ntBASIC20.34■□□□□ 0.85
ZFC3H1O60293 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
ZFC3H1O60293 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.34■□□□□ 0.85
ZFC3H1O60293 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ZFC3H1O60293 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.34■□□□□ 0.85
ZFC3H1O60293 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFC3H1O60293 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZFC3H1O60293 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.34■□□□□ 0.85
ZFC3H1O60293 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.34■□□□□ 0.85
ZFC3H1O60293 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ZFC3H1O60293 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ZFC3H1O60293 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.34■□□□□ 0.85
ZFC3H1O60293 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ZFC3H1O60293 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZFC3H1O60293 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
ZFC3H1O60293 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZFC3H1O60293 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZFC3H1O60293 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZFC3H1O60293 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZFC3H1O60293 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZFC3H1O60293 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.33■□□□□ 0.85
ZFC3H1O60293 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZFC3H1O60293 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
ZFC3H1O60293 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZFC3H1O60293 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZFC3H1O60293 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.33■□□□□ 0.84
ZFC3H1O60293 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
ZFC3H1O60293 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZFC3H1O60293 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZFC3H1O60293 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZFC3H1O60293 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZFC3H1O60293 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZFC3H1O60293 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.33■□□□□ 0.84
ZFC3H1O60293 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.33■□□□□ 0.84
ZFC3H1O60293 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZFC3H1O60293 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZFC3H1O60293 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.33■□□□□ 0.84
ZFC3H1O60293 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZFC3H1O60293 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.33■□□□□ 0.84
ZFC3H1O60293 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZFC3H1O60293 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFC3H1O60293 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ZFC3H1O60293 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZFC3H1O60293 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ZFC3H1O60293 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ZFC3H1O60293 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ZFC3H1O60293 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.32■□□□□ 0.84
ZFC3H1O60293 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.32■□□□□ 0.84
ZFC3H1O60293 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.32■□□□□ 0.84
ZFC3H1O60293 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms