Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.86■□□□□ 0.93
SMAD6O43541 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMAD6O43541 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMAD6O43541 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.86■□□□□ 0.93
SMAD6O43541 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.86■□□□□ 0.93
SMAD6O43541 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMAD6O43541 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMAD6O43541 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.85■□□□□ 0.93
SMAD6O43541 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMAD6O43541 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMAD6O43541 KRT18P68-201ENST00000392293 1000 ntBASIC20.85■□□□□ 0.93
SMAD6O43541 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMAD6O43541 AC091874.3-201ENST00000512672 1195 ntBASIC20.85■□□□□ 0.93
SMAD6O43541 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.85■□□□□ 0.93
SMAD6O43541 MYC-209ENST00000641252 345 ntBASIC20.85■□□□□ 0.93
SMAD6O43541 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMAD6O43541 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMAD6O43541 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMAD6O43541 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.85■□□□□ 0.93
SMAD6O43541 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMAD6O43541 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMAD6O43541 AC007375.3-201ENST00000600936 2314 ntBASIC20.84■□□□□ 0.93
SMAD6O43541 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMAD6O43541 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMAD6O43541 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SMAD6O43541 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMAD6O43541 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
SMAD6O43541 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
SMAD6O43541 AC083880.1-201ENST00000608266 535 ntBASIC20.84■□□□□ 0.93
SMAD6O43541 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.84■□□□□ 0.93
SMAD6O43541 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SMAD6O43541 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMAD6O43541 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.84■□□□□ 0.93
SMAD6O43541 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMAD6O43541 AC005229.4-201ENST00000610085 2198 ntBASIC20.83■□□□□ 0.93
SMAD6O43541 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMAD6O43541 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
SMAD6O43541 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.83■□□□□ 0.93
SMAD6O43541 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.83■□□□□ 0.93
SMAD6O43541 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMAD6O43541 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMAD6O43541 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMAD6O43541 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMAD6O43541 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.83■□□□□ 0.93
SMAD6O43541 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.83■□□□□ 0.93
SMAD6O43541 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.83■□□□□ 0.93
SMAD6O43541 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.83■□□□□ 0.93
SMAD6O43541 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.83■□□□□ 0.93
SMAD6O43541 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.83■□□□□ 0.93
SMAD6O43541 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.83■□□□□ 0.93
SMAD6O43541 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SMAD6O43541 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.83■□□□□ 0.92
SMAD6O43541 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SMAD6O43541 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.83■□□□□ 0.92
SMAD6O43541 CLDN5-201ENST00000403084 2357 ntBASIC20.82■□□□□ 0.92
SMAD6O43541 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SMAD6O43541 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMAD6O43541 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.82■□□□□ 0.92
SMAD6O43541 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.82■□□□□ 0.92
SMAD6O43541 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMAD6O43541 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMAD6O43541 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMAD6O43541 AC121338.2-201ENST00000622535 1744 ntBASIC20.82■□□□□ 0.92
SMAD6O43541 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SMAD6O43541 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SMAD6O43541 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMAD6O43541 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.82■□□□□ 0.92
SMAD6O43541 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.82■□□□□ 0.92
SMAD6O43541 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMAD6O43541 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.82■□□□□ 0.92
SMAD6O43541 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMAD6O43541 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMAD6O43541 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMAD6O43541 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.82■□□□□ 0.92
SMAD6O43541 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SMAD6O43541 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMAD6O43541 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
SMAD6O43541 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMAD6O43541 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.81■□□□□ 0.92
SMAD6O43541 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMAD6O43541 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMAD6O43541 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMAD6O43541 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMAD6O43541 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.81■□□□□ 0.92
SMAD6O43541 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SMAD6O43541 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SMAD6O43541 AC097658.1-201ENST00000475555 843 ntBASIC20.81■□□□□ 0.92
SMAD6O43541 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.81■□□□□ 0.92
SMAD6O43541 CD99P1-205ENST00000527459 561 ntBASIC20.81■□□□□ 0.92
SMAD6O43541 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.81■□□□□ 0.92
SMAD6O43541 AL589743.5-201ENST00000616611 1050 ntBASIC20.81■□□□□ 0.92
SMAD6O43541 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMAD6O43541 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMAD6O43541 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.81■□□□□ 0.92
SMAD6O43541 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMAD6O43541 PLK5-205ENST00000642079 1969 ntBASIC20.81■□□□□ 0.92
SMAD6O43541 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SMAD6O43541 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SMAD6O43541 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.81■□□□□ 0.92
SMAD6O43541 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms