Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.57■■□□□ 1.84
KCNQ3O43525 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
KCNQ3O43525 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
KCNQ3O43525 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
KCNQ3O43525 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
KCNQ3O43525 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
KCNQ3O43525 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
KCNQ3O43525 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.56■■□□□ 1.84
KCNQ3O43525 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
KCNQ3O43525 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
KCNQ3O43525 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.56■■□□□ 1.84
KCNQ3O43525 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
KCNQ3O43525 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
KCNQ3O43525 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
KCNQ3O43525 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
KCNQ3O43525 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
KCNQ3O43525 AC244015.2-201ENST00000616358 1861 ntBASIC26.55■■□□□ 1.84
KCNQ3O43525 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
KCNQ3O43525 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
KCNQ3O43525 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
KCNQ3O43525 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
KCNQ3O43525 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
KCNQ3O43525 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
KCNQ3O43525 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
KCNQ3O43525 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
KCNQ3O43525 AC087633.2-202ENST00000565166 1439 ntBASIC26.55■■□□□ 1.84
KCNQ3O43525 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.55■■□□□ 1.84
KCNQ3O43525 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
KCNQ3O43525 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
KCNQ3O43525 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
KCNQ3O43525 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
KCNQ3O43525 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
KCNQ3O43525 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
KCNQ3O43525 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
KCNQ3O43525 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
KCNQ3O43525 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.54■■□□□ 1.84
KCNQ3O43525 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
KCNQ3O43525 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.54■■□□□ 1.84
KCNQ3O43525 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC26.54■■□□□ 1.84
KCNQ3O43525 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
KCNQ3O43525 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
KCNQ3O43525 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
KCNQ3O43525 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC26.54■■□□□ 1.84
KCNQ3O43525 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
KCNQ3O43525 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
KCNQ3O43525 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
KCNQ3O43525 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
KCNQ3O43525 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC26.53■■□□□ 1.84
KCNQ3O43525 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.53■■□□□ 1.84
KCNQ3O43525 PEX7-202ENST00000367756 680 ntTSL 3 BASIC26.53■■□□□ 1.84
KCNQ3O43525 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC26.53■■□□□ 1.84
KCNQ3O43525 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
KCNQ3O43525 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
KCNQ3O43525 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.53■■□□□ 1.84
KCNQ3O43525 C2orf69P4-201ENST00000565394 541 ntBASIC26.53■■□□□ 1.84
KCNQ3O43525 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
KCNQ3O43525 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
KCNQ3O43525 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC26.53■■□□□ 1.84
KCNQ3O43525 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
KCNQ3O43525 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
KCNQ3O43525 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
KCNQ3O43525 Z98882.1-201ENST00000622160 2253 ntBASIC26.53■■□□□ 1.84
KCNQ3O43525 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.53■■□□□ 1.84
KCNQ3O43525 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
KCNQ3O43525 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC26.52■■□□□ 1.84
KCNQ3O43525 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
KCNQ3O43525 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
KCNQ3O43525 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.52■■□□□ 1.84
KCNQ3O43525 SOX15-203ENST00000570788 1093 ntBASIC26.52■■□□□ 1.84
KCNQ3O43525 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
KCNQ3O43525 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.52■■□□□ 1.84
KCNQ3O43525 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
KCNQ3O43525 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
KCNQ3O43525 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
KCNQ3O43525 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
KCNQ3O43525 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
KCNQ3O43525 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
KCNQ3O43525 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
KCNQ3O43525 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
KCNQ3O43525 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.51■■□□□ 1.83
KCNQ3O43525 REXO2-208ENST00000539754 791 ntTSL 2 BASIC26.51■■□□□ 1.83
KCNQ3O43525 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.51■■□□□ 1.83
KCNQ3O43525 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC26.51■■□□□ 1.83
KCNQ3O43525 AC012676.1-201ENST00000574705 1949 ntBASIC26.51■■□□□ 1.83
KCNQ3O43525 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC26.51■■□□□ 1.83
KCNQ3O43525 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.5■■□□□ 1.83
KCNQ3O43525 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
KCNQ3O43525 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
KCNQ3O43525 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
KCNQ3O43525 CRK-204ENST00000574295 1391 ntTSL 5 BASIC26.5■■□□□ 1.83
KCNQ3O43525 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
KCNQ3O43525 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
KCNQ3O43525 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC26.5■■□□□ 1.83
KCNQ3O43525 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
KCNQ3O43525 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
KCNQ3O43525 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
KCNQ3O43525 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.49■■□□□ 1.83
KCNQ3O43525 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
KCNQ3O43525 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
KCNQ3O43525 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms