Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MID1O15344 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.65■□□□□ 0.9
MID1O15344 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MID1O15344 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MID1O15344 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MID1O15344 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MID1O15344 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.65■□□□□ 0.9
MID1O15344 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.65■□□□□ 0.9
MID1O15344 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MID1O15344 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MID1O15344 AC128676.1-201ENST00000454392 318 ntBASIC20.65■□□□□ 0.9
MID1O15344 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.65■□□□□ 0.9
MID1O15344 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MID1O15344 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.65■□□□□ 0.9
MID1O15344 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
MID1O15344 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
MID1O15344 EP400NL-214ENST00000641289 2402 ntBASIC20.65■□□□□ 0.9
MID1O15344 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MID1O15344 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
MID1O15344 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
MID1O15344 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
MID1O15344 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.64■□□□□ 0.89
MID1O15344 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
MID1O15344 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.64■□□□□ 0.89
MID1O15344 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.64■□□□□ 0.89
MID1O15344 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MID1O15344 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MID1O15344 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MID1O15344 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MID1O15344 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
MID1O15344 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.64■□□□□ 0.89
MID1O15344 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MID1O15344 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
MID1O15344 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.64■□□□□ 0.89
MID1O15344 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.64■□□□□ 0.89
MID1O15344 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.64■□□□□ 0.89
MID1O15344 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.64■□□□□ 0.89
MID1O15344 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
MID1O15344 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
MID1O15344 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MID1O15344 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
MID1O15344 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.63■□□□□ 0.89
MID1O15344 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MID1O15344 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.63■□□□□ 0.89
MID1O15344 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
MID1O15344 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MID1O15344 AC244015.2-201ENST00000616358 1861 ntBASIC20.63■□□□□ 0.89
MID1O15344 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.63■□□□□ 0.89
MID1O15344 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.63■□□□□ 0.89
MID1O15344 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
MID1O15344 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MID1O15344 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MID1O15344 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MID1O15344 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MID1O15344 RPS2P52-201ENST00000469610 820 ntBASIC20.63■□□□□ 0.89
MID1O15344 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
MID1O15344 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MID1O15344 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.63■□□□□ 0.89
MID1O15344 PNMA6B-201ENST00000538162 1200 ntBASIC20.63■□□□□ 0.89
MID1O15344 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MID1O15344 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.63■□□□□ 0.89
MID1O15344 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.63■□□□□ 0.89
MID1O15344 FBXW4P1-201ENST00000426721 2239 ntBASIC20.63■□□□□ 0.89
MID1O15344 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MID1O15344 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
MID1O15344 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
MID1O15344 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MID1O15344 AC092368.3-202ENST00000574180 1591 ntBASIC20.63■□□□□ 0.89
MID1O15344 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MID1O15344 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.62■□□□□ 0.89
MID1O15344 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.62■□□□□ 0.89
MID1O15344 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
MID1O15344 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MID1O15344 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.62■□□□□ 0.89
MID1O15344 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MID1O15344 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MID1O15344 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MID1O15344 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
MID1O15344 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MID1O15344 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MID1O15344 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
MID1O15344 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MID1O15344 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.62■□□□□ 0.89
MID1O15344 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.62■□□□□ 0.89
MID1O15344 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MID1O15344 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MID1O15344 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.62■□□□□ 0.89
MID1O15344 AC073648.6-201ENST00000641589 218 ntBASIC20.62■□□□□ 0.89
MID1O15344 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MID1O15344 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MID1O15344 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.62■□□□□ 0.89
MID1O15344 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
MID1O15344 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MID1O15344 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MID1O15344 AC087633.2-202ENST00000565166 1439 ntBASIC20.61■□□□□ 0.89
MID1O15344 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MID1O15344 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.61■□□□□ 0.89
MID1O15344 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MID1O15344 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MID1O15344 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms