Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFA1O15239 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA1O15239 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA1O15239 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA1O15239 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFA1O15239 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFA1O15239 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA1O15239 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA1O15239 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA1O15239 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA1O15239 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA1O15239 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA1O15239 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA1O15239 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA1O15239 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA1O15239 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA1O15239 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFA1O15239 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.04□□□□□ -0.16
NDUFA1O15239 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.04□□□□□ -0.16
NDUFA1O15239 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.04□□□□□ -0.16
NDUFA1O15239 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.04□□□□□ -0.16
NDUFA1O15239 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.04□□□□□ -0.16
NDUFA1O15239 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NDUFA1O15239 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NDUFA1O15239 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.04□□□□□ -0.16
NDUFA1O15239 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA1O15239 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
NDUFA1O15239 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
NDUFA1O15239 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NDUFA1O15239 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NDUFA1O15239 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.03□□□□□ -0.16
NDUFA1O15239 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA1O15239 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.03□□□□□ -0.16
NDUFA1O15239 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.03□□□□□ -0.16
NDUFA1O15239 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA1O15239 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NDUFA1O15239 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
NDUFA1O15239 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA1O15239 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA1O15239 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NDUFA1O15239 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA1O15239 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA1O15239 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA1O15239 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA1O15239 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.02□□□□□ -0.16
NDUFA1O15239 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NDUFA1O15239 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.02□□□□□ -0.16
NDUFA1O15239 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA1O15239 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NDUFA1O15239 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA1O15239 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NDUFA1O15239 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA1O15239 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA1O15239 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA1O15239 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.02□□□□□ -0.17
NDUFA1O15239 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA1O15239 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA1O15239 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA1O15239 AC112907.3-201ENST00000577781 2400 ntBASIC14.02□□□□□ -0.17
NDUFA1O15239 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA1O15239 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA1O15239 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA1O15239 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NDUFA1O15239 AL512408.1-201ENST00000569378 2000 ntBASIC14.02□□□□□ -0.17
NDUFA1O15239 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms