Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KPNA4O00629 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.16■□□□□ 0.66
KPNA4O00629 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.16■□□□□ 0.66
KPNA4O00629 MIR939-201ENST00000401314 82 ntBASIC19.16■□□□□ 0.66
KPNA4O00629 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.16■□□□□ 0.66
KPNA4O00629 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
KPNA4O00629 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
KPNA4O00629 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
KPNA4O00629 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KPNA4O00629 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KPNA4O00629 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KPNA4O00629 RASA4CP-201ENST00000424092 1398 ntBASIC19.16■□□□□ 0.66
KPNA4O00629 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.16■□□□□ 0.66
KPNA4O00629 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.16■□□□□ 0.66
KPNA4O00629 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KPNA4O00629 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.16■□□□□ 0.66
KPNA4O00629 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KPNA4O00629 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.15■□□□□ 0.66
KPNA4O00629 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KPNA4O00629 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.15■□□□□ 0.66
KPNA4O00629 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
KPNA4O00629 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KPNA4O00629 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KPNA4O00629 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KPNA4O00629 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.15■□□□□ 0.66
KPNA4O00629 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KPNA4O00629 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KPNA4O00629 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
KPNA4O00629 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KPNA4O00629 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KPNA4O00629 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.14■□□□□ 0.66
KPNA4O00629 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.14■□□□□ 0.66
KPNA4O00629 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
KPNA4O00629 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KPNA4O00629 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
KPNA4O00629 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
KPNA4O00629 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
KPNA4O00629 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KPNA4O00629 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KPNA4O00629 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.14■□□□□ 0.65
KPNA4O00629 AC091305.1-201ENST00000479476 895 ntBASIC19.14■□□□□ 0.65
KPNA4O00629 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.14■□□□□ 0.65
KPNA4O00629 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KPNA4O00629 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.14■□□□□ 0.65
KPNA4O00629 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KPNA4O00629 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KPNA4O00629 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
KPNA4O00629 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
KPNA4O00629 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.14■□□□□ 0.65
KPNA4O00629 AC005224.4-201ENST00000583262 1652 ntBASIC19.14■□□□□ 0.65
KPNA4O00629 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KPNA4O00629 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.14■□□□□ 0.65
KPNA4O00629 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
KPNA4O00629 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KPNA4O00629 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KPNA4O00629 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KPNA4O00629 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KPNA4O00629 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
KPNA4O00629 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.13■□□□□ 0.65
KPNA4O00629 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KPNA4O00629 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
KPNA4O00629 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
KPNA4O00629 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.13■□□□□ 0.65
KPNA4O00629 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.13■□□□□ 0.65
KPNA4O00629 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.13■□□□□ 0.65
KPNA4O00629 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
KPNA4O00629 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.13■□□□□ 0.65
KPNA4O00629 AC055733.4-201ENST00000638462 1354 ntBASIC19.13■□□□□ 0.65
KPNA4O00629 BX005040.4-201ENST00000637145 1518 ntBASIC19.13■□□□□ 0.65
KPNA4O00629 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KPNA4O00629 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KPNA4O00629 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KPNA4O00629 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.13■□□□□ 0.65
KPNA4O00629 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KPNA4O00629 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KPNA4O00629 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KPNA4O00629 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KPNA4O00629 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KPNA4O00629 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KPNA4O00629 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.12■□□□□ 0.65
KPNA4O00629 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KPNA4O00629 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.12■□□□□ 0.65
KPNA4O00629 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KPNA4O00629 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KPNA4O00629 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KPNA4O00629 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.12■□□□□ 0.65
KPNA4O00629 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KPNA4O00629 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KPNA4O00629 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.12■□□□□ 0.65
KPNA4O00629 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
KPNA4O00629 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
KPNA4O00629 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KPNA4O00629 MIR572-201ENST00000384983 95 ntBASIC19.12■□□□□ 0.65
KPNA4O00629 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.12■□□□□ 0.65
KPNA4O00629 AL031432.3-201ENST00000607698 485 ntBASIC19.12■□□□□ 0.65
KPNA4O00629 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KPNA4O00629 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KPNA4O00629 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KPNA4O00629 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
KPNA4O00629 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms