Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.01■■□□□ 1.27
SPDYE4A6NLX3 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC23.01■■□□□ 1.27
SPDYE4A6NLX3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.01■■□□□ 1.27
SPDYE4A6NLX3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPDYE4A6NLX3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.01■■□□□ 1.27
SPDYE4A6NLX3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.01■■□□□ 1.27
SPDYE4A6NLX3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPDYE4A6NLX3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.01■■□□□ 1.27
SPDYE4A6NLX3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SPDYE4A6NLX3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23■■□□□ 1.27
SPDYE4A6NLX3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23■■□□□ 1.27
SPDYE4A6NLX3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SPDYE4A6NLX3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23■■□□□ 1.27
SPDYE4A6NLX3 MAP2K4P1-201ENST00000438453 1195 ntBASIC23■■□□□ 1.27
SPDYE4A6NLX3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23■■□□□ 1.27
SPDYE4A6NLX3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23■■□□□ 1.27
SPDYE4A6NLX3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23■■□□□ 1.27
SPDYE4A6NLX3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23■■□□□ 1.27
SPDYE4A6NLX3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SPDYE4A6NLX3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23■■□□□ 1.27
SPDYE4A6NLX3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SPDYE4A6NLX3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
SPDYE4A6NLX3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SPDYE4A6NLX3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
SPDYE4A6NLX3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.99■■□□□ 1.27
SPDYE4A6NLX3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
SPDYE4A6NLX3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.99■■□□□ 1.27
SPDYE4A6NLX3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
SPDYE4A6NLX3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
SPDYE4A6NLX3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.99■■□□□ 1.27
SPDYE4A6NLX3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SPDYE4A6NLX3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SPDYE4A6NLX3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SPDYE4A6NLX3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.99■■□□□ 1.27
SPDYE4A6NLX3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
SPDYE4A6NLX3 AFG3L1P-217ENST00000557444 2447 ntBASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 GPX1P1-201ENST00000388829 606 ntBASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 PCDHAC2-203ENST00000615316 3011 ntBASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.98■■□□□ 1.27
SPDYE4A6NLX3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.97■■□□□ 1.27
SPDYE4A6NLX3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SPDYE4A6NLX3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.27
SPDYE4A6NLX3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SPDYE4A6NLX3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SPDYE4A6NLX3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SPDYE4A6NLX3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.95■■□□□ 1.26
SPDYE4A6NLX3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SPDYE4A6NLX3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SPDYE4A6NLX3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
SPDYE4A6NLX3 NCF1B-203ENST00000435988 1254 ntBASIC22.95■■□□□ 1.26
SPDYE4A6NLX3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.95■■□□□ 1.26
SPDYE4A6NLX3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SPDYE4A6NLX3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
SPDYE4A6NLX3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SPDYE4A6NLX3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms