Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC24.25■■□□□ 1.47
TMEM88BA6NKF7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC24.25■■□□□ 1.47
TMEM88BA6NKF7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC24.25■■□□□ 1.47
TMEM88BA6NKF7 AL358472.4-201ENST00000633140 710 ntBASIC24.25■■□□□ 1.47
TMEM88BA6NKF7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.25■■□□□ 1.47
TMEM88BA6NKF7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
TMEM88BA6NKF7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TMEM88BA6NKF7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TMEM88BA6NKF7 AC003102.1-202ENST00000563394 1796 ntBASIC24.24■■□□□ 1.47
TMEM88BA6NKF7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
TMEM88BA6NKF7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
TMEM88BA6NKF7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TMEM88BA6NKF7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
TMEM88BA6NKF7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC24.24■■□□□ 1.47
TMEM88BA6NKF7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TMEM88BA6NKF7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TMEM88BA6NKF7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TMEM88BA6NKF7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.24■■□□□ 1.47
TMEM88BA6NKF7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC24.23■■□□□ 1.47
TMEM88BA6NKF7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC24.23■■□□□ 1.47
TMEM88BA6NKF7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC24.23■■□□□ 1.47
TMEM88BA6NKF7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.23■■□□□ 1.47
TMEM88BA6NKF7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC24.23■■□□□ 1.47
TMEM88BA6NKF7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TMEM88BA6NKF7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.23■■□□□ 1.47
TMEM88BA6NKF7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TMEM88BA6NKF7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 AC026396.1-201ENST00000419388 421 ntBASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 AL390955.1-201ENST00000428694 934 ntBASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 FITM1-202ENST00000559294 800 ntBASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
TMEM88BA6NKF7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 AC006011.2-201ENST00000621313 1158 ntBASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TMEM88BA6NKF7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
TMEM88BA6NKF7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 AC137767.1-201ENST00000602918 1920 ntBASIC24.2■■□□□ 1.46
TMEM88BA6NKF7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM88BA6NKF7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.19■■□□□ 1.46
TMEM88BA6NKF7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM88BA6NKF7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM88BA6NKF7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
TMEM88BA6NKF7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM88BA6NKF7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC24.19■■□□□ 1.46
TMEM88BA6NKF7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC24.19■■□□□ 1.46
TMEM88BA6NKF7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM88BA6NKF7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC24.19■■□□□ 1.46
TMEM88BA6NKF7 AC010203.1-204ENST00000548782 407 ntBASIC24.19■■□□□ 1.46
TMEM88BA6NKF7 ANOS2P-203ENST00000472227 1816 ntBASIC24.19■■□□□ 1.46
TMEM88BA6NKF7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM88BA6NKF7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 AC092068.2-201ENST00000590491 1708 ntBASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms