Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMX3A6NHT5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMX3A6NHT5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMX3A6NHT5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMX3A6NHT5 AC009299.2-201ENST00000482477 511 ntBASIC17.8■□□□□ 0.44
HMX3A6NHT5 AL451085.2-201ENST00000605085 799 ntBASIC17.8■□□□□ 0.44
HMX3A6NHT5 MIR4787-201ENST00000607364 84 ntBASIC17.8■□□□□ 0.44
HMX3A6NHT5 AC092028.1-203ENST00000608262 953 ntBASIC17.8■□□□□ 0.44
HMX3A6NHT5 MIR6722-201ENST00000617286 78 ntBASIC17.8■□□□□ 0.44
HMX3A6NHT5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.8■□□□□ 0.44
HMX3A6NHT5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.8■□□□□ 0.44
HMX3A6NHT5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMX3A6NHT5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMX3A6NHT5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.8■□□□□ 0.44
HMX3A6NHT5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMX3A6NHT5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMX3A6NHT5 AC020916.1-201ENST00000587762 1774 ntBASIC17.79■□□□□ 0.44
HMX3A6NHT5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.79■□□□□ 0.44
HMX3A6NHT5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMX3A6NHT5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.79■□□□□ 0.44
HMX3A6NHT5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMX3A6NHT5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.79■□□□□ 0.44
HMX3A6NHT5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMX3A6NHT5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
HMX3A6NHT5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HMX3A6NHT5 Z92544.1-202ENST00000571933 1220 ntBASIC17.79■□□□□ 0.44
HMX3A6NHT5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.79■□□□□ 0.44
HMX3A6NHT5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
HMX3A6NHT5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HMX3A6NHT5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.79■□□□□ 0.44
HMX3A6NHT5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMX3A6NHT5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMX3A6NHT5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMX3A6NHT5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMX3A6NHT5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMX3A6NHT5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMX3A6NHT5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMX3A6NHT5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HMX3A6NHT5 AC005703.6-201ENST00000623265 1329 ntBASIC17.78■□□□□ 0.44
HMX3A6NHT5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMX3A6NHT5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMX3A6NHT5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HMX3A6NHT5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMX3A6NHT5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HMX3A6NHT5 AC093503.3-201ENST00000624917 2352 ntBASIC17.78■□□□□ 0.44
HMX3A6NHT5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HMX3A6NHT5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.78■□□□□ 0.44
HMX3A6NHT5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMX3A6NHT5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMX3A6NHT5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HMX3A6NHT5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMX3A6NHT5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HMX3A6NHT5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMX3A6NHT5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMX3A6NHT5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMX3A6NHT5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMX3A6NHT5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMX3A6NHT5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMX3A6NHT5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMX3A6NHT5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.77■□□□□ 0.44
HMX3A6NHT5 LTB4R2-202ENST00000528054 3092 ntBASIC17.77■□□□□ 0.44
HMX3A6NHT5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.44
HMX3A6NHT5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.77■□□□□ 0.44
HMX3A6NHT5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMX3A6NHT5 TSPY9P-201ENST00000440215 945 ntBASIC17.77■□□□□ 0.44
HMX3A6NHT5 TSPY11P-201ENST00000442607 1045 ntBASIC17.77■□□□□ 0.44
HMX3A6NHT5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.77■□□□□ 0.44
HMX3A6NHT5 AC009086.3-201ENST00000623486 1008 ntBASIC17.77■□□□□ 0.44
HMX3A6NHT5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.77■□□□□ 0.44
HMX3A6NHT5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMX3A6NHT5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMX3A6NHT5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
HMX3A6NHT5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMX3A6NHT5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
HMX3A6NHT5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
HMX3A6NHT5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMX3A6NHT5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMX3A6NHT5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMX3A6NHT5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
HMX3A6NHT5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMX3A6NHT5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.77■□□□□ 0.43
HMX3A6NHT5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HMX3A6NHT5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMX3A6NHT5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HMX3A6NHT5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMX3A6NHT5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMX3A6NHT5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMX3A6NHT5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMX3A6NHT5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMX3A6NHT5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMX3A6NHT5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.76■□□□□ 0.43
HMX3A6NHT5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.76■□□□□ 0.43
HMX3A6NHT5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HMX3A6NHT5 AC007225.1-201ENST00000566331 1836 ntBASIC17.76■□□□□ 0.43
HMX3A6NHT5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMX3A6NHT5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMX3A6NHT5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMX3A6NHT5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
HMX3A6NHT5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMX3A6NHT5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms