Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.86■□□□□ 0.77
CNOT1A5YKK6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.86■□□□□ 0.77
CNOT1A5YKK6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.86■□□□□ 0.77
CNOT1A5YKK6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.85■□□□□ 0.77
CNOT1A5YKK6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.85■□□□□ 0.77
CNOT1A5YKK6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.85■□□□□ 0.77
CNOT1A5YKK6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.85■□□□□ 0.77
CNOT1A5YKK6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.85■□□□□ 0.77
CNOT1A5YKK6 CYP2D8P-201ENST00000433633 1490 ntBASIC19.85■□□□□ 0.77
CNOT1A5YKK6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT1A5YKK6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT1A5YKK6 AL353807.1-201ENST00000427475 662 ntBASIC19.85■□□□□ 0.77
CNOT1A5YKK6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.85■□□□□ 0.77
CNOT1A5YKK6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.85■□□□□ 0.77
CNOT1A5YKK6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 SLC25A3P1-201ENST00000443844 931 ntBASIC19.84■□□□□ 0.77
CNOT1A5YKK6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 AC005829.2-201ENST00000571422 1056 ntBASIC19.84■□□□□ 0.77
CNOT1A5YKK6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.84■□□□□ 0.77
CNOT1A5YKK6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 AC087633.2-202ENST00000565166 1439 ntBASIC19.84■□□□□ 0.77
CNOT1A5YKK6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT1A5YKK6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNOT1A5YKK6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CNOT1A5YKK6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.83■□□□□ 0.77
CNOT1A5YKK6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNOT1A5YKK6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
CNOT1A5YKK6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
CNOT1A5YKK6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNOT1A5YKK6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT1A5YKK6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT1A5YKK6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.83■□□□□ 0.76
CNOT1A5YKK6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT1A5YKK6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT1A5YKK6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.83■□□□□ 0.76
CNOT1A5YKK6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
CNOT1A5YKK6 AC091076.1-201ENST00000610741 619 ntBASIC19.83■□□□□ 0.76
CNOT1A5YKK6 REXO1L10P-201ENST00000615707 1290 ntBASIC19.83■□□□□ 0.76
CNOT1A5YKK6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.83■□□□□ 0.76
CNOT1A5YKK6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT1A5YKK6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT1A5YKK6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT1A5YKK6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.82■□□□□ 0.76
CNOT1A5YKK6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.82■□□□□ 0.76
CNOT1A5YKK6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.82■□□□□ 0.76
CNOT1A5YKK6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.82■□□□□ 0.76
CNOT1A5YKK6 AC010947.1-201ENST00000623454 693 ntBASIC19.82■□□□□ 0.76
CNOT1A5YKK6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.82■□□□□ 0.76
CNOT1A5YKK6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT1A5YKK6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT1A5YKK6 KRT18P56-201ENST00000507275 550 ntBASIC19.81■□□□□ 0.76
CNOT1A5YKK6 C2orf69P3-201ENST00000565542 1120 ntBASIC19.81■□□□□ 0.76
CNOT1A5YKK6 AC087388.1-201ENST00000571370 1112 ntBASIC19.81■□□□□ 0.76
CNOT1A5YKK6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT1A5YKK6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.81■□□□□ 0.76
CNOT1A5YKK6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT1A5YKK6 FAM197Y1-201ENST00000421178 764 ntBASIC19.81■□□□□ 0.76
CNOT1A5YKK6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.81■□□□□ 0.76
CNOT1A5YKK6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT1A5YKK6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.81■□□□□ 0.76
CNOT1A5YKK6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT1A5YKK6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT1A5YKK6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.8■□□□□ 0.76
CNOT1A5YKK6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms