Protein–RNA interactions for Protein: A0A0J9YWF9

TRBV2, T-cell receptor beta variable 2 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV2A0A0J9YWF9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV2A0A0J9YWF9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV2A0A0J9YWF9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV2A0A0J9YWF9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV2A0A0J9YWF9 UNC93B3-201ENST00000308076 687 ntBASIC18.18■□□□□ 0.5
TRBV2A0A0J9YWF9 AC233992.3-201ENST00000607491 485 ntBASIC18.18■□□□□ 0.5
TRBV2A0A0J9YWF9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV2A0A0J9YWF9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV2A0A0J9YWF9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV2A0A0J9YWF9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV2A0A0J9YWF9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV2A0A0J9YWF9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV2A0A0J9YWF9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 AC011484.1-201ENST00000377652 1995 ntBASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 MIR4767-201ENST00000582827 78 ntBASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 AC005224.4-201ENST00000583262 1652 ntBASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV2A0A0J9YWF9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 AC099778.1-201ENST00000568593 1911 ntBASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 IGHV3-19-201ENST00000521488 291 ntBASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRBV2A0A0J9YWF9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 AL136162.1-201ENST00000607711 1078 ntBASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 AC008406.3-201ENST00000620001 1374 ntBASIC18.15■□□□□ 0.5
TRBV2A0A0J9YWF9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV2A0A0J9YWF9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV2A0A0J9YWF9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV2A0A0J9YWF9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV2A0A0J9YWF9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV2A0A0J9YWF9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBV2A0A0J9YWF9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBV2A0A0J9YWF9 AC024257.2-201ENST00000549699 147 ntBASIC18.14■□□□□ 0.49
TRBV2A0A0J9YWF9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV2A0A0J9YWF9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV2A0A0J9YWF9 AC135279.3-201ENST00000610945 1311 ntBASIC18.14■□□□□ 0.49
TRBV2A0A0J9YWF9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV2A0A0J9YWF9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV2A0A0J9YWF9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
TRBV2A0A0J9YWF9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV2A0A0J9YWF9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV2A0A0J9YWF9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV2A0A0J9YWF9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV2A0A0J9YWF9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRBV2A0A0J9YWF9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRBV2A0A0J9YWF9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV2A0A0J9YWF9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV2A0A0J9YWF9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRBV2A0A0J9YWF9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV2A0A0J9YWF9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV2A0A0J9YWF9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV2A0A0J9YWF9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV2A0A0J9YWF9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms