Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 AC011484.1-201ENST00000377652 1995 ntBASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 MIR572-201ENST00000384983 95 ntBASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 FP700111.2-201ENST00000619190 1892 ntBASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV21A0A0B4J279 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV21A0A0B4J279 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV21A0A0B4J279 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV21A0A0B4J279 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV21A0A0B4J279 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAV21A0A0B4J279 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV21A0A0B4J279 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV21A0A0B4J279 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV21A0A0B4J279 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.27■□□□□ 0.04
TRAV21A0A0B4J279 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV21A0A0B4J279 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV21A0A0B4J279 EEF1DP3-203ENST00000566025 782 ntBASIC15.27■□□□□ 0.04
TRAV21A0A0B4J279 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.27■□□□□ 0.04
TRAV21A0A0B4J279 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV21A0A0B4J279 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV21A0A0B4J279 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV21A0A0B4J279 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 PBX2P1-201ENST00000493219 1291 ntBASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV21A0A0B4J279 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 EDA-201ENST00000338901 1233 ntBASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 AC008175.2-201ENST00000612840 297 ntBASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 AC131212.1-201ENST00000613771 668 ntBASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV21A0A0B4J279 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms